revdep/failures.md
In hadley/gtable: Arrange 'Grobs' in Tables
dartR.base
- Version: 0.98
- GitHub: NA
- Source code: https://github.com/cran/dartR.base
- Date/Publication: 2024-09-19 13:20:02 UTC
- Number of recursive dependencies: 286
Run revdepcheck::cloud_details(, "dartR.base") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/dartR.base/new/dartR.base.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘dartR.base/DESCRIPTION’ ... OK
...
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘dartR.base’ can be installed ... ERROR
Installation failed.
See ‘/tmp/workdir/dartR.base/new/dartR.base.Rcheck/00install.out’ for details.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/dartR.base/old/dartR.base.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘dartR.base/DESCRIPTION’ ... OK
...
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘dartR.base’ can be installed ... ERROR
Installation failed.
See ‘/tmp/workdir/dartR.base/old/dartR.base.Rcheck/00install.out’ for details.
* DONE
Status: 1 ERROR
Hmisc
- Version: 5.1-3
- GitHub: NA
- Source code: https://github.com/cran/Hmisc
- Date/Publication: 2024-05-28 07:10:02 UTC
- Number of recursive dependencies: 170
Run revdepcheck::cloud_details(, "Hmisc") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/Hmisc/new/Hmisc.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘Hmisc/DESCRIPTION’ ... OK
...
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... OK
* checking examples ... OK
* DONE
Status: 4 NOTEs
CRAN
* using log directory ‘/tmp/workdir/Hmisc/old/Hmisc.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘Hmisc/DESCRIPTION’ ... OK
...
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... OK
* checking examples ... OK
* DONE
Status: 4 NOTEs
snplinkage
- Version: 1.2.0
- GitHub: NA
- Source code: https://github.com/cran/snplinkage
- Date/Publication: 2024-09-09 19:10:02 UTC
- Number of recursive dependencies: 153
Run revdepcheck::cloud_details(, "snplinkage") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/snplinkage/new/snplinkage.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘snplinkage/DESCRIPTION’ ... OK
...
* this is package ‘snplinkage’ version ‘1.2.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘GWASTools’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/snplinkage/old/snplinkage.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘snplinkage/DESCRIPTION’ ... OK
...
* this is package ‘snplinkage’ version ‘1.2.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘GWASTools’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
spikeSlabGAM
- Version: 1.1-20
- GitHub: https://github.com/fabian-s/spikeSlabGAM
- Source code: https://github.com/cran/spikeSlabGAM
- Date/Publication: 2024-10-22 17:30:02 UTC
- Number of recursive dependencies: 77
Run revdepcheck::cloud_details(, "spikeSlabGAM") for more info
In both
- checking whether package ‘spikeSlabGAM’ can be installed ... ERROR
Installation failed.
See ‘/tmp/workdir/spikeSlabGAM/new/spikeSlabGAM.Rcheck/00install.out’ for details.
Installation
Devel
* installing *source* package ‘spikeSlabGAM’ ...
** package ‘spikeSlabGAM’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0’
gcc -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sampler.c -o sampler.o
gcc -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c spikeSlabGAM_init.c -o spikeSlabGAM_init.o
gcc -shared -L/opt/R/4.3.1/lib/R/lib -L/usr/local/lib -o spikeSlabGAM.so sampler.o spikeSlabGAM_init.o -llapack -lblas -lgfortran -lm -lquadmath -L/opt/R/4.3.1/lib/R/lib -lR
installing to /tmp/workdir/spikeSlabGAM/new/spikeSlabGAM.Rcheck/00LOCK-spikeSlabGAM/00new/spikeSlabGAM/libs
** R
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘spikeSlabGAM’
* removing ‘/tmp/workdir/spikeSlabGAM/new/spikeSlabGAM.Rcheck/spikeSlabGAM’
CRAN
* installing *source* package ‘spikeSlabGAM’ ...
** package ‘spikeSlabGAM’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0’
gcc -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sampler.c -o sampler.o
gcc -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c spikeSlabGAM_init.c -o spikeSlabGAM_init.o
gcc -shared -L/opt/R/4.3.1/lib/R/lib -L/usr/local/lib -o spikeSlabGAM.so sampler.o spikeSlabGAM_init.o -llapack -lblas -lgfortran -lm -lquadmath -L/opt/R/4.3.1/lib/R/lib -lR
installing to /tmp/workdir/spikeSlabGAM/old/spikeSlabGAM.Rcheck/00LOCK-spikeSlabGAM/00new/spikeSlabGAM/libs
** R
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘spikeSlabGAM’
* removing ‘/tmp/workdir/spikeSlabGAM/old/spikeSlabGAM.Rcheck/spikeSlabGAM’
hadley/gtable documentation built on June 13, 2025, 1:54 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
dartR.base
- Version: 0.98
- GitHub: NA
- Source code: https://github.com/cran/dartR.base
- Date/Publication: 2024-09-19 13:20:02 UTC
- Number of recursive dependencies: 286
Run revdepcheck::cloud_details(, "dartR.base") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/dartR.base/new/dartR.base.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘dartR.base/DESCRIPTION’ ... OK
...
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘dartR.base’ can be installed ... ERROR
Installation failed.
See ‘/tmp/workdir/dartR.base/new/dartR.base.Rcheck/00install.out’ for details.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/dartR.base/old/dartR.base.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘dartR.base/DESCRIPTION’ ... OK
...
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘dartR.base’ can be installed ... ERROR
Installation failed.
See ‘/tmp/workdir/dartR.base/old/dartR.base.Rcheck/00install.out’ for details.
* DONE
Status: 1 ERROR
Hmisc
- Version: 5.1-3
- GitHub: NA
- Source code: https://github.com/cran/Hmisc
- Date/Publication: 2024-05-28 07:10:02 UTC
- Number of recursive dependencies: 170
Run revdepcheck::cloud_details(, "Hmisc") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/Hmisc/new/Hmisc.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘Hmisc/DESCRIPTION’ ... OK
...
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... OK
* checking examples ... OK
* DONE
Status: 4 NOTEs
CRAN
* using log directory ‘/tmp/workdir/Hmisc/old/Hmisc.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘Hmisc/DESCRIPTION’ ... OK
...
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... OK
* checking examples ... OK
* DONE
Status: 4 NOTEs
snplinkage
- Version: 1.2.0
- GitHub: NA
- Source code: https://github.com/cran/snplinkage
- Date/Publication: 2024-09-09 19:10:02 UTC
- Number of recursive dependencies: 153
Run revdepcheck::cloud_details(, "snplinkage") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/snplinkage/new/snplinkage.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘snplinkage/DESCRIPTION’ ... OK
...
* this is package ‘snplinkage’ version ‘1.2.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘GWASTools’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/snplinkage/old/snplinkage.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘snplinkage/DESCRIPTION’ ... OK
...
* this is package ‘snplinkage’ version ‘1.2.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘GWASTools’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
spikeSlabGAM
- Version: 1.1-20
- GitHub: https://github.com/fabian-s/spikeSlabGAM
- Source code: https://github.com/cran/spikeSlabGAM
- Date/Publication: 2024-10-22 17:30:02 UTC
- Number of recursive dependencies: 77
Run revdepcheck::cloud_details(, "spikeSlabGAM") for more info
In both
- checking whether package ‘spikeSlabGAM’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/spikeSlabGAM/new/spikeSlabGAM.Rcheck/00install.out’ for details.
Installation
Devel
* installing *source* package ‘spikeSlabGAM’ ...
** package ‘spikeSlabGAM’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0’
gcc -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sampler.c -o sampler.o
gcc -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c spikeSlabGAM_init.c -o spikeSlabGAM_init.o
gcc -shared -L/opt/R/4.3.1/lib/R/lib -L/usr/local/lib -o spikeSlabGAM.so sampler.o spikeSlabGAM_init.o -llapack -lblas -lgfortran -lm -lquadmath -L/opt/R/4.3.1/lib/R/lib -lR
installing to /tmp/workdir/spikeSlabGAM/new/spikeSlabGAM.Rcheck/00LOCK-spikeSlabGAM/00new/spikeSlabGAM/libs
** R
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘spikeSlabGAM’
* removing ‘/tmp/workdir/spikeSlabGAM/new/spikeSlabGAM.Rcheck/spikeSlabGAM’
CRAN
* installing *source* package ‘spikeSlabGAM’ ...
** package ‘spikeSlabGAM’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0’
gcc -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sampler.c -o sampler.o
gcc -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c spikeSlabGAM_init.c -o spikeSlabGAM_init.o
gcc -shared -L/opt/R/4.3.1/lib/R/lib -L/usr/local/lib -o spikeSlabGAM.so sampler.o spikeSlabGAM_init.o -llapack -lblas -lgfortran -lm -lquadmath -L/opt/R/4.3.1/lib/R/lib -lR
installing to /tmp/workdir/spikeSlabGAM/old/spikeSlabGAM.Rcheck/00LOCK-spikeSlabGAM/00new/spikeSlabGAM/libs
** R
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘spikeSlabGAM’
* removing ‘/tmp/workdir/spikeSlabGAM/old/spikeSlabGAM.Rcheck/spikeSlabGAM’
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.