revdep/summary.md

In hadley/plyr: Tools for Splitting, Applying and Combining Data

Setup

Platform

|setting |value | |:--------|:----------------------------| |version |R version 3.2.0 (2015-04-16) | |system |x86_64, darwin13.4.0 | |ui |RStudio (0.99.584) | |language |(EN) | |collate |en_US.UTF-8 | |tz |America/Chicago |

Packages

|package | |version |date |source | |:----------|:--|:-------|:----------|:--------------| |abind | |1.4-3 |2015-03-13 |CRAN (R 3.2.0) | |doParallel | |1.0.8 |2014-02-28 |CRAN (R 3.2.0) | |foreach | |1.4.2 |2014-04-11 |CRAN (R 3.2.0) | |iterators | |1.0.7 |2014-04-11 |CRAN (R 3.2.0) | |itertools | |0.1-3 |2014-03-12 |CRAN (R 3.2.0) | |Rcpp | |0.11.6 |2015-05-01 |CRAN (R 3.2.0) | |testthat | |0.10.0 |2015-05-22 |CRAN (R 3.2.0) |

Check results

311 checked out of 312 dependencies

abctools (1.0.2)

Maintainer: Matt Nunes [e-mail] Bug reports: http://github.com/dennisprangle/abctools/issues

checking whether package ‘abctools’ can be installed ... ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/abctools.Rcheck/00install.out’ for details.
Status: 1 ERROR

abd (0.2-7)

Maintainer: Kevin M. Middleton [e-mail]

OK

acs (1.2)

Maintainer: Ezra Haber Glenn [e-mail]

checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  confint.acs dim.acs length.acs prompt.acs
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.

checking R code for possible problems ... NOTE
geo.lookup: no visible binding for global variable ‘fips.state’
geo.lookup: no visible binding for global variable
  ‘fips.county.subdivision’
geo.lookup: no visible binding for global variable ‘fips.school’
geo.make : .geo.unit.make: no visible binding for global variable
  ‘fips.american.indian.area’
geo.make : .geo.unit.make: no visible binding for global variable
  ‘fips.state’
geo.make : .geo.unit.make: no visible binding for global variable
  ‘fips.county’
geo.make : .geo.unit.make: no visible binding for global variable
  ‘fips.county.subdivision’
geo.make : .geo.unit.make: no visible binding for global variable
  ‘fips.place’
geo.make : .geo.unit.make: no visible binding for global variable
  ‘fips.school’

DONE
Status: 2 NOTEs

afex (0.13-145)

Maintainer: Henrik Singmann [e-mail]

OK

aLFQ (1.3.2)

Maintainer: George Rosenberger [e-mail]

checking whether package ‘aLFQ’ can be installed ... ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/aLFQ.Rcheck/00install.out’ for details.
Status: 1 ERROR

alm (0.4.0)

Maintainer: Scott Chamberlain [e-mail] Bug reports: http://www.github.com/ropensci/alm/issues

OK

AntWeb (0.7)

Maintainer: 'Karthik Ram' [e-mail] Bug reports: https://github.com/ropensci/AntWeb/issues

OK

AppliedPredictiveModeling (1.1-6)

Maintainer: Max Kuhn [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
  ‘ellipse’ ‘lattice’
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.

checking R code for possible problems ... NOTE
bookTheme: no visible global function definition for ‘trellis.par.set’
transparentTheme: no visible global function definition for
  ‘trellis.par.set’
upperp: no visible global function definition for ‘ellipse’
upperp: no visible global function definition for ‘panel.xyplot’
upperp: no visible global function definition for ‘trellis.par.get’

DONE
Status: 3 NOTEs

APSIM (0.8.0)

Maintainer: Justin Fainges [e-mail]

OK

aqp (1.8-6)

Maintainer: Dylan Beaudette [e-mail]

OK

ARPobservation (1.1)

Maintainer: James E. Pustejovsky [e-mail]

OK

ARTool (0.9.5)

Maintainer: Matthew Kay [e-mail] Bug reports: https://github.com/mjskay/ARTool/issues/new

OK

asVPC (1.0.2)

Maintainer: Eun-Kyung Lee [e-mail]

OK

bams (1.6)

Maintainer: Toby Dylan Hocking [e-mail]

checking package dependencies ... NOTE
Packages suggested but not available for checking: ‘GLAD’ ‘DNAcopy’ ‘gada’

checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
  ‘DNAcopy’ ‘GLAD’ ‘cghseg’ ‘changepoint’ ‘gada’ ‘grid’ ‘proto’
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Missing or unexported object: ‘ggplot2::coord_transform’
Unexported objects imported by ':::' calls:
  ‘cghseg:::segmeanCO’ ‘ggplot2:::GeomRect’
  See the note in ?`:::` about the use of this operator.

checking R code for possible problems ... NOTE
dnacopy.smoothvec : <anonymous>: no visible global function definition
  for ‘smooth.CNA’
dnacopy.smoothvec : <anonymous>: no visible global function definition
  for ‘segment’
dnacopy.smoothvec : <anonymous>: no visible binding for global variable
  ‘segment’
gada.results : <anonymous> : <anonymous>: no visible global function
  definition for ‘WextIextToSegments’
geom_tallrect: no visible global function definition for ‘proto’
geom_tallrect : draw_groups: no visible global function definition for
  ‘unit’
run.pelt: no visible binding for global variable ‘cpt.mean’
runglad: no visible global function definition for ‘as.profileCGH’
runglad : <anonymous>: no visible binding for global variable ‘daglad’
runglad : <anonymous> : <anonymous>: no visible binding for global
  variable ‘glad’

checking line endings in Makefiles ... NOTE
Found the following Makefile(s) without a final LF:
  inst/article/Makefile
Some ‘make’ programs ignore lines not ending in LF.

DONE
Status: 4 NOTEs

BatchExperiments (1.4.1)

Maintainer: Michel Lang [e-mail] Bug reports: https://github.com/tudo-r/BatchExperiments/issues

checking dependencies in R code ... NOTE
Unexported objects imported by ':::' calls:
  ‘BatchJobs:::addIntModulo’ ‘BatchJobs:::buffer’
  ‘BatchJobs:::checkDir’ ‘BatchJobs:::checkId’ ‘BatchJobs:::checkIds’
  ‘BatchJobs:::checkPart’ ‘BatchJobs:::createShardedDirs’
  ‘BatchJobs:::dbConnectToJobsDB’ ‘BatchJobs:::dbCreateJobStatusTable’
  ‘BatchJobs:::dbDoQuery’ ‘BatchJobs:::dbFindDone’
  ‘BatchJobs:::dbFindRunning’ ‘BatchJobs:::dbRemoveJobs’
  ‘BatchJobs:::dbSelectWithIds’ ‘BatchJobs:::getJobDirs’
  ‘BatchJobs:::getJobInfoInternal’ ‘BatchJobs:::getKillJob’
  ‘BatchJobs:::getListJobs’ ‘BatchJobs:::getRandomSeed’
  ‘BatchJobs:::getResult’ ‘BatchJobs:::isRegistryDir’
  ‘BatchJobs:::makeRegistryInternal’ ‘BatchJobs:::saveRegistry’
  ‘BatchJobs:::seeder’ ‘BatchJobs:::syncRegistry’
  See the note in ?`:::` about the use of this operator.

DONE
Status: 1 NOTE

bayesGDS (0.6.1)

Maintainer: Michael Braun [e-mail]

OK

bayesPop (5.3-4)

Maintainer: Hana Sevcikova [e-mail]

OK

bcpa (1.1)

Maintainer: Eliezer Gurarie [e-mail]

OK

bdvis (0.1.0)

Maintainer: Vijay Barve [e-mail]

OK

bear (2.6.4)

Maintainer: Yung-jin Lee [e-mail]

checking dependencies in R code ... NOTE
'library' or 'require' call to ‘plyr’ in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.

DONE
Status: 1 NOTE

benchmark (0.3-6)

Maintainer: Manuel J. A. Eugster [e-mail]

checking package dependencies ... NOTE
Package suggested but not available for checking: ‘Rgraphviz’

checking dependencies in R code ... NOTE
'library' or 'require' call to ‘multcomp’ in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.

checking R code for possible problems ... NOTE
boxplot.AlgorithmPerformance: no visible binding for global variable
  ‘algorithms’
boxplot.AlgorithmPerformance: no visible binding for global variable
  ‘value’
boxplot.AlgorithmPerformance: no visible binding for global variable
  ‘samples’
bsgraph0.dist: no visible global function definition for ‘addEdge’
bsgraph0.graphNEL: no visible global function definition for
  ‘getDefaultAttrs’
bsgraph0.graphNEL: no visible global function definition for ‘agopen’
densityplot.AlgorithmPerformance: no visible binding for global
  variable ‘value’
densityplot.AlgorithmPerformance: no visible binding for global
  variable ‘algorithms’
mi: no visible global function definition for ‘mi.plugin’
patch.relation_class_ids: no visible global function definition for
  ‘relation_is_strict_weak_order’
plot.DatasetCharacterization: no visible binding for global variable
  ‘characteristics’
plot.DatasetCharacterization: no visible binding for global variable
  ‘value’
plot.DatasetCharacterization: no visible binding for global variable
  ‘samples’
plot.TestResult: no visible binding for global variable ‘samples’
plot.TestResult: no visible binding for global variable ‘value’
stripchart.AlgorithmPerformance: no visible binding for global variable
  ‘algorithms’
stripchart.AlgorithmPerformance: no visible binding for global variable
  ‘value’
stripchart.AlgorithmPerformance: no visible binding for global variable
  ‘samples’

checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘graph’

DONE
Status: 4 NOTEs

BEQI2 (2.0-0)

Maintainer: Dennis Walvoort [e-mail]

OK

bigml (0.1.2)

Maintainer: Leon Hwang [e-mail] Bug reports: https://github.com/bigmlcom/bigml-r/issues

OK

Biograph (2.0.4)

Maintainer: Frans Willekens [e-mail]

OK

biom (0.3.12)

Maintainer: Paul J. McMurdie [e-mail] Bug reports: https://github.com/joey711/biom/issues

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.

DONE
Status: 1 NOTE

bmk (1.0)

Maintainer: Matthew Krachey [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

checking dependencies in R code ... NOTE
'library' or 'require' calls to packages already attached by Depends:
  ‘coda’ ‘functional’ ‘plyr’
  Please remove these calls from your code.
Packages in Depends field not imported from:
  ‘coda’ ‘functional’ ‘plyr’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.

checking R code for possible problems ... NOTE
bmkconverge: no visible global function definition for ‘Compose’
bmksensitive: no visible global function definition for ‘Compose’
bmksummary: no visible global function definition for ‘Compose’
bmksummary: no visible global function definition for ‘Curry’
bmksummary: no visible global function definition for ‘mcmc’
bmksummary: no visible global function definition for ‘mcmc.list’
bmksummary: no visible global function definition for ‘effectiveSize’
bmksummary: no visible global function definition for ‘gelman.diag’

DONE
Status: 3 NOTEs

bold (0.2.6)

Maintainer: Scott Chamberlain [e-mail] Bug reports: https://github.com/ropensci/bold/issues

checking package dependencies ... NOTE
Package suggested but not available for checking: ‘sangerseqR’

DONE
Status: 1 NOTE

boottol (2.0)

Maintainer: Garrett Schiltgen [e-mail]

OK

broom (0.3.7)

Maintainer: David Robinson [e-mail] Bug reports: http://github.com/dgrtwo/broom/issues

OK

BSGS (1.0)

Maintainer: Kuo-Jung Lee [e-mail]

OK

BTSPAS (2014.0901)

Maintainer: Carl J Schwarz [e-mail]

checking package dependencies ... NOTE
Package suggested but not available for checking: ‘BRugs’

checking whether package ‘BTSPAS’ can be installed ... ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/BTSPAS.Rcheck/00install.out’ for details.
Status: 1 ERROR, 1 NOTE

caret (6.0-47)

Maintainer: Max Kuhn [e-mail]

OK

caretEnsemble (1.0.0)

Maintainer: Zachary A. Mayer [e-mail] Bug reports: https://github.com/zachmayer/caretEnsemble/issues

checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
  3 - 2 == 1

  testthat results ================================================================
  OK: 348 SKIPPED: 0 FAILED: 6
  1. Error: Warnings issued for missing data correctly 
  2. Error: NA preservation and standard errors work right 
  3. Error: We can ensemble models and handle missingness across predictors 
  4. Failure (at test-optimizers.R#122): Warnings and fallbacks in degenerate cases 
  5. Failure (at test-optimizers.R#129): Warnings and fallbacks in degenerate cases 
  6. Failure (at test-optimizers.R#130): Warnings and fallbacks in degenerate cases 

  Error: testthat unit tests failed
  Execution halted

DONE
Status: 1 ERROR

cda (1.5.1)

Maintainer: Baptiste Auguie [e-mail]

checking whether package ‘cda’ can be installed ... ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/cda.Rcheck/00install.out’ for details.
Status: 1 ERROR

CDM (4.3-0)

Maintainer: Alexander Robitzsch [e-mail]

checking whether package ‘CDM’ can be installed ... [26s/26s] ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/CDM.Rcheck/00install.out’ for details.
Status: 1 ERROR

chemosensors (0.7.8)

Maintainer: Andrey Ziyatdinov [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.

checking dependencies in R code ... NOTE
'library' or 'require' call to ‘doMC’ in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.

DONE
Status: 2 NOTEs

ChemoSpec (4.0.1)

Maintainer: Bryan A. Hanson [e-mail] Bug reports: https://github.com/bryanhanson/ChemoSpec/issues

checking package dependencies ... NOTE
Package suggested but not available for checking: ‘speaq’

checking examples ... ERROR
Running examples in ‘ChemoSpec-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: clupaSpectra
> ### Title: Conduct Hierarchical Cluster-Based Peak Alignment on a Spectra
> ###   Object
> ### Aliases: clupaSpectra
> ### Keywords: utilities
> 
> ### ** Examples
> 
> data(alignMUD)
> plotSpectra(alignMUD, which = 1:20, lab.pos = 4.5, offset = 0.1,
+   yrange = c(0, 1900), amp = 500, xlim = c(1.5, 1.8),
+   main = "Misaligned NMR Spectra (alignMUD)")
> aMUD <- clupaSpectra(alignMUD)
Error in clupaSpectra(alignMUD) : 
  You need to install package speaq to use this function
Execution halted

DONE
Status: 1 ERROR, 1 NOTE

classifly (0.4)

Maintainer: Hadley Wickham [e-mail]

checking package dependencies ... NOTE
Package suggested but not available for checking: ‘rggobi’

checking dependencies in R code ... NOTE
'library' or 'require' call to ‘rggobi’ in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.

DONE
Status: 2 NOTEs

classify (1.3)

Maintainer: Dr Chris Wheadon [e-mail]

checking whether package ‘classify’ can be installed ... ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/classify.Rcheck/00install.out’ for details.
Status: 1 ERROR

clhs (0.5-4)

Maintainer: Pierre Roudier [e-mail]

OK

clickstream (1.1.4)

Maintainer: Michael Scholz [e-mail]

OK

clusterfly (0.4)

Maintainer: Hadley Wickham [e-mail]

checking package dependencies ... ERROR
Package required but not available: ‘rggobi’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Status: 1 ERROR

coefplot (1.2.0)

Maintainer: Jared P. Lander [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
Deprecated license: BSD

DONE
Status: 1 NOTE

confidence (1.1-0)

Maintainer: Dennis J. J. Walvoort [e-mail]

OK

cpca (0.1.2)

Maintainer: Andrey Ziyatdinov [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

DONE
Status: 1 NOTE

CPMCGLM (1.1)

Maintainer: Jeremie Riou [e-mail]

OK

cshapes (0.4-2)

Maintainer: Nils B. Weidmann [e-mail]

checking installed package size ... NOTE
  installed size is  5.3Mb
  sub-directories of 1Mb or more:
    shp   5.2Mb

DONE
Status: 1 NOTE

d3Network (0.5.2.1)

Maintainer: Christopher Gandrud [e-mail] Bug reports: https://github.com/christophergandrud/d3Network/issues

OK

data.table (1.9.4)

Maintainer: Matt Dowle [e-mail] Bug reports: https://github.com/Rdatatable/data.table/issues

OK

dataRetrieval (2.2.1)

Maintainer: Laura DeCicco [e-mail]

checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
  > library(testthat)
  > library(dataRetrieval)
  > test_check("dataRetrieval")
  1. Failure (at tests_imports.R#107): External importWaterML1 test --------------
  ncol(data) == 10 isn't true

  Read 7 items
  testthat results ================================================================
  OK: 37 SKIPPED: 0 FAILED: 1
  1. Failure (at tests_imports.R#107): External importWaterML1 test 

  Error: testthat unit tests failed
  Execution halted

DONE
Status: 1 ERROR

dcmr (1.0)

Maintainer: Diane Losardo [e-mail]

OK

decctools (0.2.1)

Maintainer: James Keirstead [e-mail]

OK

Deducer (0.7-7)

Maintainer: Ian Fellows [e-mail]

checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  as.matrix.cor.matrix plot.cor.matrix print.contin.table
  print.contin.tests print.contingency.tables print.cor.matrix
  print.freq.table print.multi.test sort.data.frame summary.lm
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.

DONE
Status: 1 NOTE

demi (1.1.2)

Maintainer: Sten Ilmjarv [e-mail]

checking package dependencies ... ERROR
Packages required but not available: ‘affxparser’ ‘affy’ ‘oligo’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Status: 1 ERROR

dendextend (0.18.3)

Maintainer: Tal Galili [e-mail] Bug reports: https://github.com/talgalili/dendextend/issues

checking package dependencies ... NOTE
Package which this enhances but not available for checking: ‘labeltodendro’

checking Rd cross-references ... NOTE
Packages unavailable to check Rd xrefs: ‘WGCNA’, ‘moduleColor’, ‘distory’

DONE
Status: 2 NOTEs

DescribeDisplay (0.2.4)

Maintainer: Di Cook [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
Deprecated license: BSD

checking top-level files ... NOTE
Non-standard files/directories found at top level:
  ‘ggobi-xml’ ‘load.r’ ‘write-xml.rnw’

checking dependencies in R code ... NOTE
Package in Depends field not imported from: ‘proto’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.

DONE
Status: 3 NOTEs

discreteRV (1.2.1)

Maintainer: Eric Hare [e-mail] Bug reports: https://github.com/erichare/discreteRV/issues

OK

dostats (1.3.2)

Maintainer: Andrew Redd [e-mail]

OK

dropR (0.1)

Maintainer: Matthias Bannert [e-mail]

OK

dynsurv (0.2-2)

Maintainer: Jun Yan [e-mail]

OK

EBMAforecast (0.42)

Maintainer: Jacob Montgomery [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
  ‘Hmisc’ ‘abind’ ‘ensembleBMA’ ‘methods’ ‘plyr’ ‘separationplot’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.

checking R code for possible problems ... NOTE
plot,FDatFitLogit: no visible binding for global variable ‘y’
plot,FDatFitNormal: no visible binding for global variable ‘y’

DONE
Status: 3 NOTEs

ecoengine (1.9.1)

Maintainer: Karthik Ram [e-mail] Bug reports: https://github.com/ropensci/ecoengine/issues

OK

eeptools (0.3.1)

Maintainer: Jared E. Knowles [e-mail]

checking R code for possible problems ... NOTE
moves_calc: no visible binding for global variable ‘id’

DONE
Status: 1 NOTE

EIAdata (0.0.3)

Maintainer: Matthew Brigida [e-mail]

OK

emdatr (0.3)

Maintainer: Gopi Goteti [e-mail]

OK

emdbook (1.3.8)

Maintainer: Ben Bolker [e-mail]

OK

enigma (0.1.1)

Maintainer: Scott Chamberlain [e-mail] Bug reports: https://github.com/ropengov/enigma/issues

OK

EpiContactTrace (0.8.8)

Maintainer: Stefan Widgren [e-mail]

checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
  ‘animation’ ‘ggmap’
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.

checking R code for possible problems ... NOTE
Animate : create_map: no visible global function definition for ‘ggmap’
Animate : create_map: no visible global function definition for
  ‘geom_segment’
Animate : create_map: no visible global function definition for
  ‘aes_string’
Animate : create_map: no visible global function definition for ‘labs’
Animate : create_map: no visible global function definition for
  ‘ggtitle’
Animate : create_map: no visible global function definition for
  ‘ani.pause’
Animate: no visible global function definition for ‘saveHTML’

DONE
Status: 2 NOTEs

eurostat (1.0.16)

Maintainer: Lahti Leo [e-mail] Bug reports: https://github.com/ropengov/eurostat/issues

OK

evolqg (0.1-5)

Maintainer: Diogo Melo [e-mail] Bug reports: https://github.com/lem-usp/evolqg/issues

OK

extracat (1.7-1)

Maintainer: Alexander Pilhoefer [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

DONE
Status: 1 NOTE

ez (4.2-2)

Maintainer: Michael A. Lawrence [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.

DONE
Status: 1 NOTE

ezsim (0.5.5)

Maintainer: TszKin Julian Chan [e-mail] Bug reports: TszKin Julian Chan [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

DONE
Status: 1 NOTE

FAOSTAT (2.0)

Maintainer: Filippo Gheri [e-mail]

checking data for non-ASCII characters ... NOTE
  Note: found 179 marked UTF-8 strings

DONE
Status: 1 NOTE

fishmove (0.3-3)

Maintainer: Johannes Radinger [e-mail]

OK

freqweights (1.0.1)

Maintainer: Emilio Torres-Manzanera [e-mail]

OK

fSRM (0.6.1)

Maintainer: Felix Schönbrodt [e-mail]

OK

gcbd (0.2.5)

Maintainer: Dirk Eddelbuettel [e-mail]

checking package dependencies ... NOTE
Package suggested but not available for checking: ‘gputools’

checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
  ‘RSQLite’ ‘lattice’ ‘plyr’ ‘reshape’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.

checking R code for possible problems ... NOTE
createDatabase: no visible global function definition for ‘dbDriver’
createDatabase: no visible global function definition for
  ‘dbBuildTableDefinition’
createDatabase: no visible global function definition for ‘dbConnect’
createDatabase: no visible global function definition for ‘dbGetQuery’
createDatabase: no visible global function definition for
  ‘dbDisconnect’
databaseResult: no visible global function definition for ‘dbConnect’
databaseResult: no visible global function definition for ‘dbDriver’
databaseResult: no visible global function definition for
  ‘dbWriteTable’
databaseResult: no visible global function definition for
  ‘dbDisconnect’
figure_Lattice: no visible global function definition for ‘melt’
figure_Lattice: no visible global function definition for
  ‘trellis.par.get’
figure_Lattice: no visible global function definition for
  ‘trellis.par.set’
figure_LatticeByArch: no visible global function definition for ‘melt’
figure_LatticeByArch: no visible global function definition for
  ‘trellis.par.get’
figure_LatticeByArch: no visible global function definition for
  ‘trellis.par.set’
figure_LogLogIntercept: no visible global function definition for
  ‘trellis.par.get’
figure_LogLogIntercept: no visible global function definition for
  ‘trellis.par.set’
figure_LogLogLattice: no visible global function definition for ‘melt’
figure_LogLogLattice: no visible global function definition for
  ‘trellis.par.get’
figure_LogLogLattice: no visible global function definition for
  ‘trellis.par.set’
figure_LogLogSlopes: no visible global function definition for
  ‘trellis.par.get’
figure_LogLogSlopes: no visible global function definition for
  ‘trellis.par.set’
getBenchmarkData: no visible global function definition for ‘dbConnect’
getBenchmarkData: no visible global function definition for ‘dbDriver’
getBenchmarkData: no visible global function definition for
  ‘dbGetQuery’
getBenchmarkData: no visible global function definition for
  ‘dbDisconnect’
loglogAnalysis: no visible global function definition for ‘dbConnect’
loglogAnalysis: no visible global function definition for ‘dbDriver’
loglogAnalysis: no visible global function definition for ‘dbGetQuery’
loglogAnalysis: no visible global function definition for
  ‘dbDisconnect’
loglogAnalysis: no visible global function definition for ‘ddply’
loglogAnalysis: no visible global function definition for ‘melt’
luBenchmark: no visible global function definition for ‘lu’
matmultBenchmarkgputools: no visible global function definition for
  ‘gpuMatMult’
qrBenchmarkgputools: no visible global function definition for ‘gpuQr’
svdBenchmarkgputools: no visible global function definition for
  ‘gpuSvd’

checking re-building of vignette outputs ... NOTE
Error in re-building vignettes:
  ...
Loading required package: RSQLite
Loading required package: DBI
Loading required package: plyr
Loading required package: reshape

Attaching package: ‘reshape’

The following objects are masked from ‘package:plyr’:

    rename, round_any

Loading required package: lattice
Warning in packageDescription("gputools") :
  no package 'gputools' was found
Error: processing vignette 'gcbd.Rnw' failed with diagnostics:
at gcbd.Rnw:860, subscript out of bounds
Execution halted

DONE
Status: 4 NOTEs

gcookbook (1.0)

Maintainer: Winston Chang [e-mail]

OK

GDELTtools (1.2)

Maintainer: Stephen R. Haptonstahl [e-mail]

checking dependencies in R code ... NOTE
Package in Depends field not imported from: ‘tools’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.

checking R code for possible problems ... NOTE
IsValidGDELT: no visible global function definition for ‘md5sum’

DONE
Status: 2 NOTEs

gdm (1.0)

Maintainer: Matthew C. Fitzpatrick [e-mail]

OK

gems (1.0.0)

Maintainer: Luisa Salazar Vizcaya [e-mail]

OK

gemtc (0.6-2)

Maintainer: Gert van Valkenhoef [e-mail]

checking package dependencies ... NOTE
Package suggested but not available for checking: ‘BRugs’

checking examples ... ERROR
Running examples in ‘gemtc-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: mtc.hy.prior
> ### Title: Set priors for the heterogeneity parameter
> ### Aliases: mtc.hy.prior mtc.hy.empirical.lor
> 
> ### ** Examples
> 
> file <- system.file("extdata/luades-smoking.gemtc", package="gemtc")
> network <- read.mtc.network(file)
> 
> # NOTE: the mtc.run commands below are for illustrative purposes, such a small
> # number of iterations should obviously not be used in practice.
> 
> # set a uniform prior standard deviation
> model1 <- mtc.model(network, hy.prior=mtc.hy.prior("std.dev", "dunif", 0, 2))
> result <- mtc.run(model1, n.adapt=10, n.iter=10)
Warning: running command 'which wine' had status 1

WARNING: The locate database (/var/db/locate.database) does not exist.
To create the database, run the following command:

  sudo launchctl load -w /System/Library/LaunchDaemons/com.apple.locate.plist

Please be aware that the database can take some time to generate; once
the database has been created, this message will no longer appear.

Warning: running command 'locate wine | grep bin/wine$' had status 1
Error in findUnixBinary(x = "wine") : couldn't find wine binary file
Calls: mtc.run ... mtc.sample -> as.mcmc.list -> <Anonymous> -> findUnixBinary
Execution halted

DONE
Status: 1 ERROR, 1 NOTE

geospt (1.0-1)

Maintainer: Alí Santacruz [e-mail]

OK

gfcanalysis (1.2)

Maintainer: Alex Zvoleff [e-mail] Bug reports: https://github.com/azvoleff/gfcanalysis/issues

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

DONE
Status: 1 NOTE

GGally (0.5.0)

Maintainer: Barret Schloerke [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.

DONE
Status: 1 NOTE

ggenealogy (0.1.0)

Maintainer: Lindsay Rutter [e-mail]

OK

ggmap (2.4)

Maintainer: David Kahle [e-mail] Bug reports: https://github.com/dkahle/ggmap/issues

checking examples ... ERROR
Running examples in ‘ggmap-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: geocode
> ### Title: Geocode
> ### Aliases: geocode geocodeQueryCheck
> 
> ### ** Examples
> 
> # Types of input
> geocode('Baylor University')
Information from URL : http://maps.googleapis.com/maps/api/geocode/json?address=Baylor+University&sensor=false
        lon      lat
1 -97.11844 31.54822
> geocode('1600 Pennsylvania Avenue, Washington DC')
Information from URL : http://maps.googleapis.com/maps/api/geocode/json?address=1600+Pennsylvania+Avenue,+Washington+DC&sensor=false
        lon      lat
1 -76.98168 38.87866
> geocode('the white house')
Information from URL : http://maps.googleapis.com/maps/api/geocode/json?address=the+white+house&sensor=false
        lon      lat
1 -77.03653 38.89768
> geocode(c('baylor university', 'salvation army waco'))
Information from URL : http://maps.googleapis.com/maps/api/geocode/json?address=baylor+university&sensor=false
Information from URL : http://maps.googleapis.com/maps/api/geocode/json?address=salvation+army+waco&sensor=false
        lon      lat
1 -97.11844 31.54822
2 -97.12858 31.54158
> 
> # Types of output
> geocode('Baylor University', output = "latlona")
        lon      lat
1 -97.11844 31.54822
                                                        address
1 baylor university, 1311 south 5th street, waco, tx 76706, usa
> geocode('Baylor University', output = "more")
Error in data.frame(long_name = "Baylor University", short_name = "Baylor University",  : 
  arguments imply differing number of rows: 1, 0
Calls: geocode ... as.data.frame -> as.data.frame.list -> eval -> eval -> data.frame
Execution halted

DONE
Status: 1 ERROR

ggparallel (0.1.1)

Maintainer: Heike Hofmann [e-mail]

checking DESCRIPTION meta-information ... NOTE
License components which are templates and need '+ file LICENSE':
  MIT

checking top-level files ... NOTE
Non-standard file/directory found at top level:
  ‘ggparallel.Rproj’

checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
  ‘ggplot2’ ‘plyr’ ‘reshape2’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.

checking R code for possible problems ... NOTE
ggparallel : getRibbons: no visible global function definition for
  ‘melt’
ggparallel : getRibbons: no visible global function definition for
  ‘geom_ribbon’
ggparallel : getRibbons: no visible global function definition for
  ‘aes’
ggparallel : getRibbons: no visible binding for global variable ‘id’
ggparallel : getRibbons: no visible global function definition for
  ‘ddply’
ggparallel : getRibbons: no visible global function definition for ‘.’
ggparallel : getRibbons: no visible global function definition for
  ‘geom_line’
ggparallel : getRibbons: no visible global function definition for
  ‘scale_size’
ggparallel : getRibbons: no visible binding for global variable
  ‘summarise’
ggparallel: no visible global function definition for ‘melt’
ggparallel: no visible global function definition for ‘ddply’
ggparallel: no visible global function definition for ‘.’
ggparallel: no visible binding for global variable ‘summarize’
ggparallel: no visible global function definition for ‘geom_text’
ggparallel: no visible global function definition for ‘aes’
ggparallel: no visible global function definition for ‘theme’
ggparallel: no visible global function definition for ‘ggplot’
ggparallel: no visible global function definition for ‘geom_bar’
ggparallel: no visible global function definition for ‘xlab’
ggparallel: no visible global function definition for
  ‘scale_x_discrete’

checking Rd line widths ... NOTE
Rd file 'genes.Rd':
  \examples lines wider than 100 characters:
     ggparallel(list("path", "chrom"), text.offset=c(0.03, 0,-0.03), data = genes,  width=0.1, order=c(1,0), angle=0, color="white",
        scale_colour_manual(values = c(   brewer.pal("YlOrRd", n = 9), rep("grey80", 24)), guide="none") +

Rd file 'ggparallel.Rd':
  \examples lines wider than 100 characters:
     ggparallel(names(titanic)[c(1,4,2,3)], titanic, weight=1, asp=0.5, method="hammock", ratio=0.2, order=c(0,0)) +
     ggparallel(names(titanic)[c(1,4,2,3)], titanic, weight="Freq", asp=0.5, method="hammock", order=c(0,0)) +
     ggparallel(list("path", "chrom"), text.offset=c(0.03, 0,-0.03), data = genes,  width=0.1, order=c(1,0), text.angle=0, color="white",
        scale_colour_manual(values = c(   brewer.pal("YlOrRd", n = 9), rep("grey80", 24)), guide="none") +

These lines will be truncated in the PDF manual.

DONE
Status: 5 NOTEs

ggplot2 (1.0.1)

Maintainer: Hadley Wickham [e-mail] Bug reports: https://github.com/hadley/ggplot2/issues

OK

ggsubplot (0.3.2)

Maintainer: Garrett Grolemund [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.

DONE
Status: 1 NOTE

ggswissmaps (0.0.2)

Maintainer: Sandro Petrillo Burri [e-mail]

OK

ggtern (1.0.5.0)

Maintainer: Nicholas Hamilton [e-mail]

OK

ggthemes (2.1.2)

Maintainer: Jeffrey B. Arnold [e-mail] Bug reports: http://github.com/jrnold/ggthemes

OK

gpmap (0.1.1)

Maintainer: Arne B. Gjuvsland [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
  ‘foreach’ ‘ggplot2’ ‘isotone’ ‘plyr’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.

checking R code for possible problems ... NOTE
decompose_monotone: no visible global function definition for ‘%dopar%’
decompose_monotone: no visible global function definition for ‘foreach’
decompose_monotone: no visible global function definition for ‘%do%’
decompose_monotone_single: no visible global function definition for
  ‘%dopar%’
decompose_monotone_single: no visible global function definition for
  ‘foreach’
decompose_monotone_single: no visible global function definition for
  ‘laply’
degree_of_monotonicity: no visible global function definition for
  ‘%do%’
degree_of_monotonicity: no visible global function definition for
  ‘foreach’
degree_of_monotonicity_single: no visible global function definition
  for ‘aaply’
monotone_regression: no visible global function definition for
  ‘activeSet’
partial_genotype_order: no visible global function definition for
  ‘aaply’
plot1_dec: no visible global function definition for ‘%do%’
plot1_dec: no visible global function definition for ‘foreach’
plot1_dec: no visible global function definition for ‘ggplot’
plot1_dec: no visible global function definition for ‘aes_string’
plot1_dec: no visible global function definition for ‘geom_point’
plot1_dec: no visible global function definition for ‘facet_wrap’
plot1_dec: no visible global function definition for ‘labs’
plot1_orig: no visible global function definition for ‘%do%’
plot1_orig: no visible global function definition for ‘foreach’
plot1_orig: no visible global function definition for ‘ggplot’
plot1_orig: no visible global function definition for ‘aes_string’
plot1_orig: no visible global function definition for ‘geom_line’
plot1_orig: no visible global function definition for ‘labs’
plot2_dec: no visible global function definition for ‘%do%’
plot2_dec: no visible global function definition for ‘foreach’
plot2_dec: no visible global function definition for ‘ggplot’
plot2_dec: no visible global function definition for ‘aes_string’
plot2_dec: no visible global function definition for ‘geom_line’
plot2_dec: no visible global function definition for ‘facet_wrap’
plot2_dec: no visible global function definition for ‘labs’
plot2_orig: no visible global function definition for ‘%do%’
plot2_orig: no visible global function definition for ‘foreach’
plot2_orig: no visible global function definition for ‘ggplot’
plot2_orig: no visible global function definition for ‘aes_string’
plot2_orig: no visible global function definition for ‘geom_line’
plot2_orig: no visible global function definition for ‘labs’
plot3_dec: no visible global function definition for ‘%do%’
plot3_dec: no visible global function definition for ‘foreach’
plot3_dec: no visible global function definition for ‘ggplot’
plot3_dec: no visible global function definition for ‘aes_string’
plot3_dec: no visible global function definition for ‘geom_line’
plot3_dec: no visible global function definition for ‘facet_grid’
plot3_dec: no visible global function definition for ‘labs’
plot3_orig: no visible global function definition for ‘%do%’
plot3_orig: no visible global function definition for ‘foreach’
plot3_orig: no visible global function definition for ‘ggplot’
plot3_orig: no visible global function definition for ‘aes_string’
plot3_orig: no visible global function definition for ‘geom_line’
plot3_orig: no visible global function definition for ‘facet_wrap’
plot3_orig: no visible global function definition for ‘labs’

DONE
Status: 3 NOTEs

gProfileR (0.5.3)

Maintainer: Tambet Arak [e-mail]

OK

granovaGG (1.3)

Maintainer: Brian A. Danielak [e-mail]

OK

gsDesign (2.9-3)

Maintainer: Keaven Anderson [e-mail]

checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  plot.binomialSPRT plot.gsBinomialExact plot.gsDesign
  plot.gsProbability plot.ssrCP print.eEvents print.gsBoundSummary
  print.gsDesign print.gsProbability print.gsSurv print.nSurv
  print.nSurvival summary.gsDesign summary.spendfn xtable.gsSurv
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.

checking line endings in Makefiles ... NOTE
Found the following Makefile(s) without a final LF:
  inst/unitTests/Makefile
Some ‘make’ programs ignore lines not ending in LF.

DONE
Status: 2 NOTEs

GSIF (0.4-6)

Maintainer: Tomislav Hengl [e-mail]

OK

gtable (0.1.2)

Maintainer: Hadley Wickham [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.

DONE
Status: 1 NOTE

h2o (2.8.4.4)

Maintainer: Tom Kraljevic [e-mail]

checking installed package size ... NOTE
  installed size is 40.5Mb
  sub-directories of 1Mb or more:
    java  39.6Mb

DONE
Status: 1 NOTE

harvestr (0.6.0)

Maintainer: Andrew Redd [e-mail]

OK

HighDimOut (1.0.0)

Maintainer: Cheng Fan [e-mail]

OK

hillmakeR (0.2)

Maintainer: David Gilinson [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

DONE
Status: 1 NOTE

HistData (0.7-5)

Maintainer: Michael Friendly [e-mail]

checking Rd cross-references ... NOTE
Packages unavailable to check Rd xrefs: ‘Guerry’, ‘alr3’, ‘agridat’

DONE
Status: 1 NOTE

HiveR (0.2-28)

Maintainer: Bryan A. Hanson [e-mail] Bug reports: https://github.com/bryanhanson/HiveR/issues

OK

HLMdiag (0.2.5)

Maintainer: Adam Loy [e-mail]

checking whether package ‘HLMdiag’ can be installed ... [29s/29s] ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/HLMdiag.Rcheck/00install.out’ for details.
Status: 1 ERROR

hydrostats (0.2.3)

Maintainer: Nick Bond [e-mail]

OK

intsvy (1.6)

Maintainer: Daniel Caro [e-mail] Bug reports: https://github.com/eldafani/intsvy/issues

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  plot.intsvy.mean plot.intsvy.reg plot.intsvy.table
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.

DONE
Status: 2 NOTEs

IsingSampler (0.2)

Maintainer: Sacha Epskamp [e-mail]

OK

ivlewbel (1.1)

Maintainer: Alan Fernihough [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  print.lewbel.model
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.

checking R code for possible problems ... NOTE
clusterVCV: no visible global function definition for ‘estfun’
covc: no visible global function definition for ‘sandwich’
ftest: no visible global function definition for ‘vcovHC’

DONE
Status: 3 NOTEs

JAGUAR (2.0)

Maintainer: Chaitanya Acharya [e-mail]

OK

jsonlite (0.9.16)

Maintainer: Jeroen Ooms [e-mail] Bug reports: http://github.com/jeroenooms/jsonlite/issues

OK

Kernelheaping (0.5)

Maintainer: Marcus Gross [e-mail]

OK

kimisc (0.2-1)

Maintainer: Kirill Mueller [e-mail] Bug reports: https://github.com/krlmlr/kimisc/issues

OK

Kmisc (0.5.0)

Maintainer: Kevin Ushey [e-mail] Bug reports: https://github.com/kevinushey/Kmisc/issues

OK

knitrBootstrap (0.9.0)

Maintainer: Jim Hester [e-mail] Bug reports: https://github.com/jimhester/knitrBootstrap/issues

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.

DONE
Status: 1 NOTE

kobe (1.3.2)

Maintainer: Laurence Kell [e-mail]

OK

Lahman (3.0-1)

Maintainer: Michael Friendly [e-mail]

checking installed package size ... NOTE
  installed size is  7.4Mb
  sub-directories of 1Mb or more:
    data   7.2Mb

checking dependencies in R code ... NOTE
'library' or 'require' call to ‘plyr’ in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.

DONE
Status: 2 NOTEs

LakeMetabolizer (1.3.3)

Maintainer: Luke Winslow [e-mail]

OK

learningr (0.29)

Maintainer: Richie Cotton [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.

checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘pracma’

checking data for non-ASCII characters ... NOTE
  Note: found 78 marked UTF-8 strings

DONE
Status: 3 NOTEs

lfl (1.1)

Maintainer: Michal Burda [e-mail]

OK

likert (1.2)

Maintainer: Jason Bryer [e-mail] Bug reports: https://github.com/jbryer/likert/issues

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

checking dependencies in R code ... NOTE
'library' or 'require' call to ‘shiny’ in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.

checking data for non-ASCII characters ... NOTE
  Note: found 7 marked UTF-8 strings

DONE
Status: 3 NOTEs

lint (0.3)

Maintainer: Andrew Redd [e-mail]

checking R code for possible problems ... NOTE
autotest_style: no visible global function definition for ‘test_that’
test_style: no visible global function definition for
  ‘expect_equivalent’

DONE
Status: 1 NOTE

lllcrc (1.2)

Maintainer: Zach Kurtz [e-mail]

OK

lmerTest (2.0-25)

Maintainer: Alexandra Kuznetsova [e-mail]

OK

loopr (1.0.1)

Maintainer: Brandon Taylor [e-mail]

OK

lsbclust (1.0.2)

Maintainer: Pieter Schoonees [e-mail]

OK

lsmeans (2.18)

Maintainer: Russ Lenth [e-mail]

checking package dependencies ... NOTE
Packages suggested but not available for checking: ‘glmmADMB’ ‘lme4.0’

DONE
Status: 1 NOTE

lubridate (1.3.3)

Maintainer: Garrett Grolemund [e-mail] Bug reports: https://github.com/hadley/lubridate/issues

checking package dependencies ... NOTE
Packages which this enhances but not available for checking: ‘its’ ‘fts’

checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  pretty.day pretty.hour pretty.min pretty.month pretty.point
  pretty.sec pretty.unit pretty.year
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.

DONE
Status: 2 NOTEs

marked (1.1.8)

Maintainer: Jeff Laake [e-mail]

checking whether package ‘marked’ can be installed ... ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/marked.Rcheck/00install.out’ for details.
Status: 1 ERROR

medicalrisk (1.1)

Maintainer: Patrick McCormick [e-mail]

OK

meifly (0.3)

Maintainer: Hadley Wickham [e-mail] Bug reports: https://github.com/hadley/meifly/issues

OK

metafolio (0.1.0)

Maintainer: Sean C. Anderson [e-mail] Bug reports: http://github.com/seananderson/metafolio/issues

checking whether package ‘metafolio’ can be installed ... ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/metafolio.Rcheck/00install.out’ for details.
Status: 1 ERROR

metafor (1.9-7)

Maintainer: Wolfgang Viechtbauer [e-mail]

OK

metagen (1.0)

Maintainer: Thomas W. D. Möbius [e-mail]

OK

mizer (0.2)

Maintainer: Finlay Scott [e-mail]

OK

mlr (2.3)

Maintainer: Bernd Bischl [e-mail] Bug reports: https://github.com/berndbischl/mlr/issues

checking package dependencies ... NOTE
Package suggested but not available for checking: ‘xgboost’

checking dependencies in R code ... NOTE
Missing or unexported object: ‘kohonen::predict.kohonen’

checking tests ... ERROR
Running the tests in ‘tests/run-base.R’ failed.
Last 13 lines of output:
         signalCondition(e)
     }, "'multiclass.roc.default' is not an exported object from 'namespace:pROC'", quote(NULL))

  testthat results ================================================================
  OK: 1068 SKIPPED: 0 FAILED: 5
  1. Failure (at test_base_SupervisedTask.R#23): SupervisedTask 
  2. Failure (at test_base_SupervisedTask.R#27): SupervisedTask 
  3. Failure (at test_base_SupervisedTask.R#29): SupervisedTask 
  4. Failure (at test_base_UnsupervisedTask.R#6): UnsupervisedTask 
  5. Error: measures 

  Error: testthat unit tests failed
  Execution halted

DONE
Status: 1 ERROR, 2 NOTEs

mlVAR (0.1.0)

Maintainer: Sacha Epskamp [e-mail]

OK

morse (1.0.2)

Maintainer: Philippe Ruiz [e-mail]

checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
  ‘dclone’ ‘ggmcmc’ ‘ggplot2’ ‘gridExtra’ ‘lattice’ ‘rjags’
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.

checking R code for possible problems ... NOTE
.repro.DIC: no visible global function definition for ‘dic.samples’
.repro.fullsurvplot.gg: no visible global function definition for
  ‘ggplot’
.repro.fullsurvplot.gg: no visible global function definition for ‘aes’
.repro.fullsurvplot.gg: no visible global function definition for
  ‘geom_point’
.repro.fullsurvplot.gg: no visible global function definition for
  ‘geom_line’
.repro.fullsurvplot.gg: no visible global function definition for
  ‘labs’
.repro.fullsurvplot.gg: no visible global function definition for
  ‘facet_wrap’
.repro.fullsurvplot.gg: no visible global function definition for
  ‘scale_x_continuous’
.repro.fullsurvplot.gg: no visible global function definition for
  ‘scale_colour_hue’
.repro.fullsurvplot.gg: no visible global function definition for
  ‘theme’
.repro.fullsurvplot.l: no visible global function definition for
  ‘xyplot’
.repro.ggplotfit.legend: no visible global function definition for
  ‘ggplot_gtable’
.repro.ggplotfit.legend: no visible global function definition for
  ‘ggplot_build’
.repro.load.model: no visible global function definition for
  ‘jags.model’
.repro.load.model.par: no visible global function definition for
  ‘parJagsModel’
.repro.model.sampling.parameters: no visible global function definition
  for ‘coda.samples’
.repro.model.sampling.parameters: no visible global function definition
  for ‘raftery.diag’
.repro.model.sampling.parameters.par: no visible global function
  definition for ‘parCodaSamples’
.repro.model.sampling.parameters.par: no visible global function
  definition for ‘raftery.diag’
plot.repro.fit: no visible global function definition for ‘ggplot’
plot.repro.fit: no visible global function definition for ‘geom_point’
plot.repro.fit: no visible global function definition for ‘aes’
plot.repro.fit: no visible global function definition for
  ‘scale_color_manual’
plot.repro.fit: no visible global function definition for ‘geom_line’
plot.repro.fit: no visible global function definition for
  ‘scale_color_discrete’
plot.repro.fit: no visible global function definition for ‘labs’
plot.repro.fit: no visible global function definition for
  ‘scale_x_log10’
plot.repro.fit: no visible global function definition for
  ‘scale_x_continuous’
plot.repro.fit: no visible global function definition for
  ‘grid.arrange’
plot.repro.fit: no visible global function definition for ‘arrangeGrob’
repro.convergence: no visible global function definition for
  ‘gelman.diag’
repro.convergence: no visible global function definition for
  ‘autocorr.plot’
repro.convergence: no visible global function definition for ‘ggs’
repro.convergence: no visible global function definition for
  ‘ggs_traceplot’
repro.convergence: no visible global function definition for
  ‘ggs_density’
repro.convergence: no visible global function definition for
  ‘ggs_autocorrelation’
repro.convergence: no visible global function definition for
  ‘grid.rect’
repro.convergence: no visible global function definition for ‘gpar’
repro.convergence: no visible binding for global variable
  ‘grid.arrange’
repro.cumulplot: no visible global function definition for ‘ggplot’
repro.cumulplot: no visible global function definition for ‘aes’
repro.cumulplot: no visible global function definition for ‘geom_point’
repro.cumulplot: no visible global function definition for ‘labs’
repro.cumulplot: no visible global function definition for
  ‘scale_x_log10’
repro.cumulplot: no visible global function definition for
  ‘scale_colour_hue’
repro.cumulplot: no visible global function definition for ‘theme’
repro.cumulplot: no visible global function definition for
  ‘scale_x_continuous’
repro.fit: no visible global function definition for ‘coda.samples’
repro.parfit: no visible global function definition for
  ‘makePSOCKcluster’
repro.parfit: no visible global function definition for ‘jags.model’
repro.parfit: no visible global function definition for
  ‘parCodaSamples’
repro.parfit: no visible global function definition for ‘stopCluster’
repro.survplot: no visible global function definition for ‘ggplot’
repro.survplot: no visible global function definition for ‘aes’
repro.survplot: no visible global function definition for ‘stat_sum’
repro.survplot: no visible global function definition for ‘labs’
repro.survplot: no visible global function definition for
  ‘scale_x_log10’
repro.survplot: no visible global function definition for ‘theme’
repro.survplot: no visible global function definition for
  ‘element_blank’
repro.survplot: no visible global function definition for
  ‘scale_x_continuous’

DONE
Status: 2 NOTEs

mosaic (0.10.0)

Maintainer: Randall Pruim [e-mail]

checking package dependencies ... NOTE
Package which this enhances but not available for checking: ‘manipulate’

DONE
Status: 1 NOTE

MplusAutomation (0.6-3)

Maintainer: Michael Hallquist [e-mail]

checking package dependencies ... NOTE
Package suggested but not available for checking: ‘rhdf5’

checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
  ‘relimp’ ‘rhdf5’ ‘tcltk’
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.

checking R code for possible problems ... NOTE
readModels: no visible global function definition for ‘h5dump’
showSummaryTable: no visible global function definition for ‘showData’

DONE
Status: 3 NOTEs

mpoly (0.1.0)

Maintainer: David Kahle [e-mail] Bug reports: https://github.com/dkahle/mpoly/issues

OK

MRMR (0.1.3)

Maintainer: Brian A. Fannin [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

checking R code for possible problems ... NOTE
PlotResiduals: no visible global function definition for ‘.’

DONE
Status: 2 NOTEs

multilevelPSA (1.2.2)

Maintainer: Jason Bryer [e-mail] Bug reports: https://github.com/jbryer/multilevelPSA/issues

checking dependencies in R code ... NOTE
'library' or 'require' call to ‘MASS’ in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.

DONE
Status: 1 NOTE

MVN (4.0)

Maintainer: Selcuk Korkmaz [e-mail]

OK

mvnfast (0.1.3)

Maintainer: Matteo Fasiolo [e-mail]

checking whether package ‘mvnfast’ can be installed ... [18s/19s] ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/mvnfast.Rcheck/00install.out’ for details.
Status: 1 ERROR

NAPPA (2.0.1)

Maintainer: Mark Wappett [e-mail]

OK

nat.nblast (1.5)

Maintainer: James Manton [e-mail]

OK

nat (1.6.6)

Maintainer: Greg Jefferis [e-mail] Bug reports: https://github.com/jefferis/nat/issues

OK

neotoma (1.3.0)

Maintainer: Simon J. Goring [e-mail] Bug reports: https://github.com/ropensci/neotoma/issues

OK

networkD3 (0.1.2.1)

Maintainer: Christopher Gandrud [e-mail]

OK

networkreporting (0.0.1)

Maintainer: Dennis Feehan [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.

DONE
Status: 1 NOTE

networkTomography (0.3)

Maintainer: Alexander W Blocker [e-mail]

checking whether package ‘networkTomography’ can be installed ... ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/networkTomography.Rcheck/00install.out’ for details.
Status: 1 ERROR

ngramr (1.4.5)

Maintainer: Sean Carmody [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

DONE
Status: 1 NOTE

NlsyLinks (1.302)

Maintainer: Will Beasley [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
Malformed Description field: should contain one or more complete sentences.

checking dependencies in R code ... NOTE
Namespace in Imports field not imported from: ‘methods’
  All declared Imports should be used.

checking R code for possible problems ... NOTE
ReadCsvNlsy79Gen1: no visible binding for global variable
  ‘SubjectDetails79’
ReadCsvNlsy79Gen2: no visible binding for global variable
  ‘SubjectDetails79’

DONE
Status: 3 NOTEs

NPC (1.0.0)

Maintainer: Devin Caughey [e-mail]

OK

npIntFactRep (1.2)

Maintainer: Jos Feys [e-mail]

OK

npsm (0.5)

Maintainer: John Kloke [e-mail]

checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  print.fkk.test print.hogg.test print.rank.test
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.

DONE
Status: 1 NOTE

nullabor (0.3.1)

Maintainer: Di Cook [e-mail]

OK

okmesonet (0.1.5)

Maintainer: Brady Allred [e-mail]

checking R code for possible problems ... NOTE
nearstn: no visible binding for global variable ‘okstations’
nearstn: no visible binding for global variable ‘Commissioned’
nearstn: no visible binding for global variable ‘Decommissioned’
okmts: no visible binding for global variable ‘okstations’
okmts: no visible binding for global variable ‘TIME’
totalprecip: no visible binding for global variable ‘TIME’

DONE
Status: 1 NOTE

OpasnetUtils (1.2.0)

Maintainer: Teemu Rintala [e-mail]

OK

openair (1.5)

Maintainer: David Carslaw [e-mail] Bug reports: http://github.com/davidcarslaw/openair/issues

checking whether package ‘openair’ can be installed ... ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/openair.Rcheck/00install.out’ for details.
Status: 1 ERROR

OpenRepGrid (0.1.9)

Maintainer: Mark Heckmann [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

DONE
Status: 1 NOTE

opentraj (1.0)

Maintainer: Thalles Silva [e-mail]

OK

optiRum (0.35)

Maintainer: Stephanie Locke [e-mail] Bug reports: https://github.com/stephlocke/optiRum/issues

OK

OutbreakTools (0.1-13)

Maintainer: Thibaut Jombart [e-mail]

OK

paleobioDB (0.3)

Maintainer: Sara Varela [e-mail] Bug reports: https://github.com/ropensci/paleobioDB/issues

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

DONE
Status: 1 NOTE

paleofire (1.1.6)

Maintainer: Olivier Blarquez [e-mail]

OK

parboost (0.1.4)

Maintainer: Ronert Obst [e-mail]

OK

pathological (0.0-6)

Maintainer: Richard Cotton [e-mail] Bug reports: https://github.com/richierocks/pathological/issues

OK

pedometrics (0.6-2)

Maintainer: Alessandro Samuel-Rosa [e-mail]

checking Rd cross-references ... NOTE
Packages unavailable to check Rd xrefs: ‘VecStatGraphs2D’, ‘mvtsplot’

DONE
Status: 1 NOTE

peptider (0.2)

Maintainer: Eric Hare [e-mail] Bug reports: https://github.com/heike/peptider/issues

OK

pitchRx (1.7)

Maintainer: Carson Sievert [e-mail] Bug reports: http://github.com/cpsievert/pitchRx/issues

OK

planar (1.5.2)

Maintainer: Baptiste Auguie [e-mail]

checking whether package ‘planar’ can be installed ... ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/planar.Rcheck/00install.out’ for details.
Status: 1 ERROR

plotKML (0.5-2)

Maintainer: Tomislav Hengl [e-mail]

OK

plotSEMM (2.0)

Maintainer: Phil Chalmers [e-mail]

OK

plumbr (0.6.9)

Maintainer: Michael Lawrence [e-mail]

OK

plusser (0.4-0)

Maintainer: Christoph Waldhauser [e-mail]

OK

PMA (1.0.9)

Maintainer: Daniela Witten [e-mail]

checking package dependencies ... ERROR
Package required but not available: ‘impute’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Status: 1 ERROR

pogit (1.0.0)

Maintainer: Michaela Dvorzak [e-mail]

OK

pointRes (1.0.2)

Maintainer: Marieke van der Maaten-Theunissen [e-mail]

OK

pollstR (1.2.0)

Maintainer: Jeffrey B. Arnold [e-mail] Bug reports: https://github.com/rOpenGov/pollstR/issues

OK

PopGenReport (2.1)

Maintainer: Bernd Gruber [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘ecodist’

DONE
Status: 2 NOTEs

pqantimalarials (0.2)

Maintainer: J. Patrick Renschler [e-mail]

OK

predictmeans (0.99)

Maintainer: Dongwen Luo [e-mail]

OK

primerTree (1.0.1)

Maintainer: Jim Hester [e-mail]

OK

pROC (1.8)

Maintainer: Xavier Robin [e-mail]

checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  ci.auc ci.coords ci.se ci.sp ci.thresholds roc.test
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.

DONE
Status: 1 NOTE

profileR (0.2-1)

Maintainer: Christopher David Desjardins [e-mail]

OK

profr (0.3.1)

Maintainer: Hadley Wickham [e-mail] Bug reports: https://github.com/hadley/profr/issues

checking dependencies in R code ... NOTE
'library' or 'require' call to ‘ggplot2’ in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.

checking R code for possible problems ... NOTE
ggplot.profr: no visible global function definition for ‘ggplot’
ggplot.profr: no visible global function definition for ‘geom_rect’
ggplot.profr: no visible global function definition for ‘aes’
ggplot.profr: no visible global function definition for ‘geom_text’
ggplot.profr: no visible global function definition for
  ‘scale_y_continuous’
ggplot.profr: no visible global function definition for
  ‘scale_x_continuous’

DONE
Status: 2 NOTEs

ProjectTemplate (0.6)

Maintainer: Kirill Mueller [e-mail] Bug reports: https://github.com/johnmyleswhite/ProjectTemplate/issues

checking package dependencies ... NOTE
Package suggested but not available for checking: ‘RODBC’

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.

DONE
Status: 2 NOTEs

proteomics (0.2)

Maintainer: Thomas W. D. Möbius [e-mail]

OK

psd (1.0-1)

Maintainer: Andrew J. Barbour [e-mail] Bug reports: https://github.com/abarbour/psd/issues

checking whether package ‘psd’ can be installed ... ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/psd.Rcheck/00install.out’ for details.
Status: 1 ERROR

psytabs (0.5)

Maintainer: Johannes Beller [e-mail]

checking package dependencies ... NOTE
Depends: includes the non-default packages:
  ‘psych’ ‘plyr’ ‘rtf’ ‘R2HTML’ ‘mokken’ ‘lavaan’ ‘semTools’
Adding so many packages to the search path is excessive and importing
selectively is preferable.

checking dependencies in R code ... NOTE
'library' or 'require' calls to packages already attached by Depends:
  ‘R2HTML’ ‘mokken’ ‘plyr’ ‘rtf’
  Please remove these calls from your code.
Packages in Depends field not imported from:
  ‘R2HTML’ ‘lavaan’ ‘mokken’ ‘plyr’ ‘psych’ ‘rtf’ ‘semTools’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.

checking R code for possible problems ... NOTE
demographicTable: no visible global function definition for ‘colwise’
measurementInvarianceTable: no visible global function definition for
  ‘fitMeasures’
measurementInvarianceTable: no visible global function definition for
  ‘colwise’
mokkenTable: no visible global function definition for
  ‘check.monotonicity’
mokkenTable: no visible global function definition for ‘check.iio’
saveTable: no visible global function definition for ‘HTMLInitFile’
saveTable: no visible global function definition for ‘HTMLEndFile’
saveTable: no visible global function definition for ‘RTF’
saveTable: no visible global function definition for ‘addParagraph’
saveTable: no visible global function definition for ‘addTable’
saveTable: no visible global function definition for ‘done’

checking Rd line widths ... NOTE
Rd file 'measurementInvarianceTable.Rd':
  \examples lines wider than 100 characters:
     mi.strict.result <- measurementInvariance(HW.model, data=HolzingerSwineford1939, strict=TRUE, group="school")
     mi.robust.result <- measurementInvariance(HW.model, data=HolzingerSwineford1939, estimator="MLM", group="school")
     mi.robstrict.result <- measurementInvariance(HW.model, data=HolzingerSwineford1939, estimator="MLM", strict=TRUE, group="school")

Rd file 'normTable.Rd':
  \examples lines wider than 100 characters:
     tab.4 <- normTable(myData.sumscore, from = 0, to = 12, statistics=c("PR", "T"), group=myData$employment)
     tab.5 <- normTable(myData.sumscore, from = 0, to = 12, statistics=c("T"), group=list(myData$sex, myData$employment))
     list.5 <- normTable(myData.sumscore, from = 0, to = 12, statistics=c("PR", "T", "Z", "z"), group=list(myData$sex, myData$employment), a ... [TRUNCATED]

These lines will be truncated in the PDF manual.

DONE
Status: 4 NOTEs

pxR (0.40.0)

Maintainer: Carlos J. Gil Bellosta [e-mail]

checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  as.px.array
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.

checking R code for possible problems ... NOTE
read.px : get.attributes: no visible global function definition for
  ‘ldply’
read.px: no visible global function definition for ‘str_locate_all’
read.px: no visible global function definition for ‘str_sub’
read.px: no visible global function definition for ‘str_length’

DONE
Status: 2 NOTEs

pxweb (0.5.54)

Maintainer: Mans Magnusson [e-mail] Bug reports: https://github.com/rOpenGov/pxweb/issues

checking tests ... ERROR
Running the tests in ‘tests/testthat_get_pxweb.R’ failed.
Last 13 lines of output:
  3. Failure (at test-get_pxweb_metadata.R#45): baseURL 2 ------------------------
  {
      api_test_file <- get_pxweb_metadata(path = test)
  } threw an error

  testthat results ================================================================
  OK: 56 SKIPPED: 0 FAILED: 3
  1. Failure (at test-get_pxweb_data.R#137): get_pxweb_data() 
  2. Failure (at test-get_pxweb_data.R#146): get_pxweb_data() 
  3. Failure (at test-get_pxweb_metadata.R#45): baseURL 2 

  Error: testthat unit tests failed
  Execution halted

DONE
Status: 1 ERROR

qgraph (1.3.1)

Maintainer: Sacha Epskamp [e-mail]

OK

rAltmetric (0.6)

Maintainer: Karthik Ram [e-mail] Bug reports: https://github.com/ropensci/rAltmetric/issues/

OK

RAM (1.2.1)

Maintainer: Wen Chen [e-mail]

checking package dependencies ... NOTE
Package suggested but not available for checking: ‘Heatplus’

checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘Heatplus’

DONE
Status: 2 NOTEs

rapport (0.51)

Maintainer: Aleksandar Blagotić [e-mail] Bug reports: https://github.com/rapporter/rapport/issues

checking dependencies in R code ... NOTE
Namespace in Imports field not imported from: ‘grDevices’
  All declared Imports should be used.
Packages in Depends field not imported from:
  ‘lattice’ ‘pander’ ‘plyr’ ‘yaml’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Unexported objects imported by ':::' calls:
  ‘tools:::fetchRdDB’ ‘utils:::index.search’
  See the note in ?`:::` about the use of this operator.

checking R code for possible problems ... NOTE
as.character.rp.inputs: no visible global function definition for
  ‘as.yaml’
as.character.rp.meta: no visible global function definition for
  ‘as.yaml’
guess.input: no visible global function definition for ‘p’
htest: no visible global function definition for ‘is.formula’
htest: no visible global function definition for ‘each’
htest : <anonymous>: no visible global function definition for ‘each’
pct: no visible global function definition for ‘panderOptions’
print.rapport: no visible global function definition for
  ‘pandoc.header’
print.rapport: no visible global function definition for
  ‘redraw.recordedplot’
print.rapport: no visible global function definition for ‘evalsOptions’
print.rp.inputs : <anonymous>: no visible global function definition
  for ‘p’
rapport: no visible global function definition for ‘evalsOptions’
rapport: no visible global function definition for ‘p’
rapport : <anonymous>: no visible global function definition for ‘p’
rp.barplot: no visible global function definition for ‘barchart’
rp.boxplot: no visible global function definition for ‘bwplot’
rp.densityplot: no visible global function definition for ‘densityplot’
rp.desc: no visible global function definition for ‘each’
rp.dotplot: no visible global function definition for ‘dotplot’
rp.hist : panel: no visible global function definition for
  ‘panel.histogram’
rp.hist : panel: no visible global function definition for
  ‘panel.densityplot’
rp.hist: no visible global function definition for ‘histogram’
rp.lineplot: no visible global function definition for ‘xyplot’
rp.qqplot: no visible global function definition for ‘qqmath’
rp.scatterplot: no visible global function definition for ‘xyplot’
tpl.check: no visible global function definition for ‘p’
tpl.export: no visible global function definition for ‘pander.return’
tpl.export: no visible global function definition for ‘evalsOptions’
tpl.export: no visible binding for global variable ‘Pandoc’
tpl.export: no visible global function definition for
  ‘pandoc.header.return’
tpl.export : <anonymous>: no visible global function definition for
  ‘pandoc.header.return’
tpl.export : <anonymous>: no visible global function definition for
  ‘pander.return’
tpl.export: no visible global function definition for
  ‘pandoc.image.return’
tpl.inputs: no visible global function definition for ‘yaml.load’
tpl.inputs: no visible global function definition for ‘p’
tpl.meta: no visible global function definition for ‘yaml.load’
tpl.meta : <anonymous>: no visible global function definition for ‘p’
tpl.meta: no visible global function definition for ‘p’
tpl.renew: no visible global function definition for ‘as.yaml’

checking Rd line widths ... NOTE
Rd file 'get.tags.Rd':
  \usage lines wider than 90 characters:
       get.tags(tag.type = c("all", "header.open", "header.close", "comment.open", "comment.close"),

Rd file 'rp.desc.Rd':
  \examples lines wider than 100 characters:
     rp.desc("age", c("gender", "student"), c("Average" = mean, "Deviation" = sd), ius2008, remove.duplicate = FALSE)

Rd file 'rp.lineplot.Rd':
  \examples lines wider than 100 characters:
     rp.lineplot(partner, age, data = rp.desc('age', 'partner', fn = 'mean', data=ius2008)) ## TODO: fix....
     rp.lineplot(partner, age, gender, data = rp.desc('age', c('gender', 'partner'), fn = 'mean', data=ius2008))
     rp.lineplot(partner, age, groups = gender, data=rp.desc('age', c('gender', 'partner'), fn = 'mean', data = ius2008))

Rd file 'rp.qqplot.Rd':
  \examples lines wider than 100 characters:
     rp.qqplot(ius2008$age, panel = function(x) {panel.qqmath(x); panel.qqmathline(x, distribution = qnorm)} )

These lines will be truncated in the PDF manual.

DONE
Status: 3 NOTEs

rapportools (1.0)

Maintainer: Gergely Daróczi [e-mail] Bug reports: https://github.com/rapporter/rapportools/issues

checking dependencies in R code ... NOTE
Package in Depends field not imported from: ‘reshape’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.

checking R code for possible problems ... NOTE
freq: no visible global function definition for ‘melt’
rp.desc: no visible global function definition for ‘melt.data.frame’
rp.desc: no visible global function definition for ‘cast’
rp.freq: no visible global function definition for ‘melt’

DONE
Status: 2 NOTEs

rattle (3.4.1)

Maintainer: Graham Williams [e-mail]

checking package dependencies ... NOTE
Packages suggested but not available for checking:
  ‘graph’ ‘RBGL’ ‘rggobi’ ‘RODBC’ ‘pkgDepTools’ ‘Rgraphviz’

checking installed package size ... NOTE
  installed size is  6.9Mb
  sub-directories of 1Mb or more:
    data   2.1Mb
    etc    2.5Mb
    po     1.2Mb

checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
  ‘Hmisc’ ‘RBGL’ ‘RGtk2’ ‘RGtk2Extras’ ‘ROCR’ ‘RODBC’ ‘Rgraphviz’ ‘XML’
  ‘ada’ ‘arules’ ‘bitops’ ‘cairoDevice’ ‘colorspace’ ‘e1071’ ‘fBasics’
  ‘foreign’ ‘fpc’ ‘graph’ ‘grid’ ‘kernlab’ ‘methods’ ‘nnet’
  ‘pkgDepTools’ ‘pmml’ ‘randomForest’ ‘reshape’ ‘rggobi’ ‘rpart’
  ‘stats’ ‘survival’ ‘utils’
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.

checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  predict.hclust predict.kmeans print.summary.nnet
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.

checking R code for possible problems ... NOTE
Found an obsolete/platform-specific call in the following functions:
  ‘openMyDevice’ ‘printPlot’ ‘savePlotToFile’
Found the platform-specific devices:
  ‘win.metafile’ ‘win.print’
dev.new() is the preferred way to open a new device, in the unlikely
event one is needed.

DONE
Status: 5 NOTEs

rbefdata (0.3.5)

Maintainer: Claas-Thido Pfaff [e-mail]

checking R code for possible problems ... NOTE
bef.get.categories_for: no visible binding for global variable ‘id’
bef.portal.get.categories_for: no visible binding for global variable
  ‘id’

DONE
Status: 1 NOTE

rbhl (0.1.0)

Maintainer: Scott Chamberlain [e-mail] Bug reports: https://github.com/ropensci/rbhl/issues

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.

DONE
Status: 1 NOTE

RbioRXN (1.5.1)

Maintainer: Byoungnam Min [e-mail]

checking package dependencies ... ERROR
Packages required but not available: ‘fmcsR’ ‘ChemmineR’ ‘KEGGREST’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Status: 1 ERROR

rbison (0.4.5)

Maintainer: Scott Chamberlain [e-mail] Bug reports: https://github.com/ropensci/rbison/issues

OK

rcbalance (1.6)

Maintainer: Samuel D. Pimentel [e-mail]

OK

Rcell (1.3-2)

Maintainer: Alan Bush [e-mail]

checking package dependencies ... NOTE
Package suggested but not available for checking: ‘EBImage’

checking dependencies in R code ... NOTE
Unexported objects imported by ':::' calls:
  ‘ggplot2:::Geom’ ‘ggplot2:::Position’ ‘ggplot2:::Stat’
  See the note in ?`:::` about the use of this operator.

checking R code for possible problems ... NOTE
.nchar: possible error in nchar(x, type, allowNA, keepNA = FALSE):
  unused argument (keepNA = FALSE)

DONE
Status: 3 NOTEs

rclinicaltrials (1.4.1)

Maintainer: Michael C Sachs [e-mail]

OK

RcmdrPlugin.KMggplot2 (0.2-0)

Maintainer: Triad sou. [e-mail]

checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
  ‘ggplot2’ ‘grid’ ‘methods’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Missing or unexported object: ‘ggplot2::digest.ggplot’

checking R code for possible problems ... NOTE
ggsaveKmg2: no visible global function definition for ‘last_plot’
theme_natrisk: no visible global function definition for ‘%+replace%’
theme_natrisk: no visible global function definition for
  ‘element_blank’
theme_natrisk: no visible global function definition for ‘element_rect’
theme_natrisk21: no visible global function definition for ‘%+replace%’
theme_natrisk21: no visible global function definition for
  ‘element_blank’
theme_natrisk21: no visible global function definition for
  ‘element_rect’
theme_natrisk21: no visible global function definition for ‘unit’
theme_natriskbg: no visible global function definition for ‘%+replace%’
theme_natriskbg: no visible global function definition for
  ‘element_blank’
theme_natriskbg: no visible global function definition for
  ‘element_rect’
theme_natriskbg: no visible global function definition for ‘unit’
theme_simple: no visible global function definition for ‘%+replace%’
theme_simple: no visible global function definition for ‘theme_bw’
theme_simple: no visible global function definition for ‘element_rect’
theme_simple: no visible global function definition for ‘element_blank’

DONE
Status: 2 NOTEs

rcrossref (0.3.0)

Maintainer: Scott Chamberlain [e-mail] Bug reports: https://github.com/ropensci/rcrossref/issues

OK

RDML (0.8-4)

Maintainer: Konstantin A. Blagodatskikh [e-mail]

OK

rdryad (0.1.1)

Maintainer: Scott Chamberlain [e-mail] Bug reports: https://github.com/ropensci/rdryad/issues

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
Malformed Description field: should contain one or more complete sentences.

DONE
Status: 1 NOTE

RDSTK (1.1)

Maintainer: Ryan Elmore [e-mail]

OK

rebird (0.1.1)

Maintainer: Rafael Maia [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

DONE
Status: 1 NOTE

REDCapR (0.7-1)

Maintainer: Will Beasley [e-mail]

checking package dependencies ... NOTE
Package suggested but not available for checking: ‘RODBC’

checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
  ‘RODBC’ ‘testthat’
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.

checking tests ... ERROR
Running the tests in ‘tests/test-all.R’ failed.
Last 13 lines of output:
  5. Error: Read, Insert, and Update 
  6. Error: Smoke Test 
  7. Error: Write Batch -Insert 
  8. Error: Write Batch -Update One Field 
  9. Error: Write Batch -Update Two Fields 
  1. Error: Smoke Test 
  2. Error: Write One Shot -Insert 
  3. Error: Write One Shot -Update One Field 
  4. Error: Write One Shot -Update Two Fields 
  5. ...

  Error: testthat unit tests failed
  Execution halted

DONE
Status: 1 ERROR, 2 NOTEs

RefManageR (0.8.63)

Maintainer: Mathew W. McLean [e-mail] Bug reports: https://github.com/mwmclean/RefManageR/issues

checking foreign function calls ... NOTE
Foreign function call to a different package:
  .External("do_read_bib", ..., PACKAGE = "bibtex")
See chapter ‘System and foreign language interfaces’ in the ‘Writing R
Extensions’ manual.

DONE
Status: 1 NOTE

remix (2.1)

Maintainer: David Hajage [e-mail]

checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
  ‘plyr’ ‘survival’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
':::' call which should be '::': ‘Hmisc:::label.default’
  See the note in ?`:::` about the use of this operator.

checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  as.data.frame.correlation as.data.frame.freq as.data.frame.summarize
  as.data.frame.summarize.by as.data.frame.survival
  as.data.frame.tabular
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.

checking R code for possible problems ... NOTE
cross: no visible binding for global variable ‘is.Surv’
is.numeric.and.not.surv: no visible global function definition for
  ‘is.Surv’
remix: no visible global function definition for ‘is.formula’
remix : <anonymous>: no visible global function definition for
  ‘is.Surv’
remix: no visible binding for global variable ‘is.Surv’
remix: no visible global function definition for ‘llply’
summarize.by: no visible global function definition for ‘dlply’
summarize.by: no visible global function definition for ‘.’
summarize.data.frame.by: no visible global function definition for
  ‘dlply’
survival: no visible global function definition for ‘survfit’
survival: no visible global function definition for ‘daply’
survival: no visible global function definition for ‘.’
test.survival.logrank: no visible global function definition for
  ‘survdiff’

checking Rd \usage sections ... NOTE
S3 methods shown with full name in documentation object 'as.data.frame.correlation':
  ‘as.data.frame.correlation’

S3 methods shown with full name in documentation object 'as.data.frame.freq':
  ‘as.data.frame.freq’

S3 methods shown with full name in documentation object 'as.data.frame.summarize':
  ‘as.data.frame.summarize’

S3 methods shown with full name in documentation object 'as.data.frame.summarize.by':
  ‘as.data.frame.summarize.by’

S3 methods shown with full name in documentation object 'as.data.frame.survival':
  ‘as.data.frame.survival’

S3 methods shown with full name in documentation object 'as.data.frame.tabular':
  ‘as.data.frame.tabular’

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.

DONE
Status: 4 NOTEs

repmis (0.4.4)

Maintainer: Christopher Gandrud [e-mail] Bug reports: https://github.com/christophergandrud/repmis/issues

OK

reshape (0.8.5)

Maintainer: Hadley Wickham [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.

checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  all.vars.character as.data.frame.cast_df as.data.frame.cast_matrix
  as.matrix.cast_df as.matrix.cast_matrix colsplit.character
  colsplit.factor melt.array melt.cast_df melt.cast_matrix
  melt.data.frame melt.default melt.list melt.matrix melt.table
  print.cast_df print.cast_matrix rescaler.data.frame rescaler.default
  rescaler.matrix str.cast_df str.cast_matrix
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.

DONE
Status: 2 NOTEs

reshape2 (1.4.1)

Maintainer: Hadley Wickham [e-mail] Bug reports: https://github.com/hadley/reshape/issues

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.

DONE
Status: 1 NOTE

reshapeGUI (0.1.0)

Maintainer: Jason Crowley [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.

checking top-level files ... NOTE
Non-standard file/directory found at top level:
  ‘load.r’

checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
  ‘gWidgets’ ‘gWidgetsRGtk2’ ‘plyr’ ‘reshape2’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.

checking R code for possible problems ... NOTE
reshapeGUI: no visible global function definition for ‘gwindow’
reshapeGUI: no visible global function definition for ‘gnotebook’
reshapeGUI: no visible global function definition for ‘size<-’
reshapeGUI: no visible global function definition for ‘ggroup’
reshapeGUI: no visible global function definition for ‘gtable’
reshapeGUI: no visible global function definition for ‘addSpring’
reshapeGUI: no visible global function definition for ‘gbutton’
reshapeGUI: no visible global function definition for ‘glabel’
reshapeGUI: no visible global function definition for ‘gedit’
reshapeGUI: no visible global function definition for ‘gcheckbox’
reshapeGUI: no visible global function definition for ‘gdf’
reshapeGUI: no visible global function definition for ‘visible<-’
reshapeGUI: no visible global function definition for
  ‘addHandlerClicked’
reshapeGUI : <anonymous>: no visible global function definition for
  ‘gmessage’
reshapeGUI : <anonymous>: no visible global function definition for
  ‘svalue’
reshapeGUI : <anonymous>: no visible global function definition for
  ‘svalue<-’
reshapeGUI : <anonymous>: no visible global function definition for
  ‘delete’
reshapeGUI : <anonymous>: no visible global function definition for
  ‘add’
reshapeGUI : <anonymous>: no visible global function definition for
  ‘gdf’
reshapeGUI : <anonymous>: no visible global function definition for
  ‘visible<-’
reshapeGUI: no visible global function definition for
  ‘addHandlerChanged’
updateMeltCodeBox: no visible global function definition for ‘svalue<-’

DONE
Status: 4 NOTEs

RevEcoR (0.99.2)

Maintainer: Yang Cao [e-mail]

OK

rfigshare (0.3.6)

Maintainer: Carl Boettiger [e-mail] Bug reports: https://github.com/ropensci/rfigshare/issues

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.

DONE
Status: 1 NOTE

RForcecom (0.7)

Maintainer: Takekatsu Hiramura [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.

checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
  ‘RCurl’ ‘XML’ ‘plyr’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.

checking R code for possible problems ... NOTE
rforcecom.create: no visible global function definition for
  ‘basicHeaderGatherer’
rforcecom.create: no visible global function definition for
  ‘basicTextGatherer’
rforcecom.create: no visible global function definition for
  ‘curlPerform’
rforcecom.create: no visible global function definition for ‘xmlRoot’
rforcecom.create: no visible global function definition for
  ‘xmlTreeParse’
rforcecom.create: no visible global function definition for ‘xmlValue’
rforcecom.create: no visible global function definition for
  ‘xmlToDataFrame’
rforcecom.create: no visible global function definition for
  ‘getNodeSet’
rforcecom.create: no visible global function definition for ‘xmlParse’
rforcecom.delete: no visible global function definition for
  ‘basicHeaderGatherer’
rforcecom.delete: no visible global function definition for
  ‘basicTextGatherer’
rforcecom.delete: no visible global function definition for
  ‘curlPerform’
rforcecom.delete: no visible global function definition for ‘xmlRoot’
rforcecom.delete: no visible global function definition for
  ‘xmlTreeParse’
rforcecom.delete: no visible global function definition for ‘xmlValue’
rforcecom.getObjectDescription: no visible global function definition
  for ‘basicHeaderGatherer’
rforcecom.getObjectDescription: no visible global function definition
  for ‘basicTextGatherer’
rforcecom.getObjectDescription: no visible global function definition
  for ‘curlPerform’
rforcecom.getObjectDescription: no visible global function definition
  for ‘xmlRoot’
rforcecom.getObjectDescription: no visible global function definition
  for ‘xmlTreeParse’
rforcecom.getObjectDescription: no visible global function definition
  for ‘xmlValue’
rforcecom.getObjectDescription: no visible global function definition
  for ‘getNodeSet’
rforcecom.getObjectDescription: no visible global function definition
  for ‘xmlParse’
rforcecom.getObjectDescription: no visible binding for global variable
  ‘xmlToList’
rforcecom.getObjectList: no visible global function definition for
  ‘basicHeaderGatherer’
rforcecom.getObjectList: no visible global function definition for
  ‘basicTextGatherer’
rforcecom.getObjectList: no visible global function definition for
  ‘curlPerform’
rforcecom.getObjectList: no visible global function definition for
  ‘xmlRoot’
rforcecom.getObjectList: no visible global function definition for
  ‘xmlTreeParse’
rforcecom.getObjectList: no visible global function definition for
  ‘xmlValue’
rforcecom.getObjectList: no visible global function definition for
  ‘xmlToDataFrame’
rforcecom.getObjectList: no visible global function definition for
  ‘getNodeSet’
rforcecom.getObjectList: no visible global function definition for
  ‘xmlParse’
rforcecom.getServerTimestamp: no visible global function definition for
  ‘basicHeaderGatherer’
rforcecom.getServerTimestamp: no visible global function definition for
  ‘basicTextGatherer’
rforcecom.getServerTimestamp: no visible global function definition for
  ‘curlPerform’
rforcecom.login: no visible global function definition for
  ‘basicHeaderGatherer’
rforcecom.login: no visible global function definition for
  ‘basicTextGatherer’
rforcecom.login: no visible global function definition for
  ‘curlPerform’
rforcecom.login: no visible global function definition for ‘xmlRoot’
rforcecom.login: no visible global function definition for
  ‘xmlTreeParse’
rforcecom.login: no visible global function definition for ‘xmlValue’
rforcecom.query: no visible global function definition for
  ‘basicHeaderGatherer’
rforcecom.query: no visible global function definition for
  ‘basicTextGatherer’
rforcecom.query: no visible global function definition for ‘curlEscape’
rforcecom.query: no visible global function definition for
  ‘curlPerform’
rforcecom.query: no visible global function definition for ‘xmlRoot’
rforcecom.query: no visible global function definition for
  ‘xmlTreeParse’
rforcecom.query: no visible global function definition for ‘xmlValue’
rforcecom.query: no visible global function definition for ‘getNodeSet’
rforcecom.query: no visible global function definition for ‘xmlParse’
rforcecom.query: no visible binding for global variable ‘xmlToList’
rforcecom.query: no visible global function definition for ‘rbind.fill’
rforcecom.queryMore: no visible global function definition for
  ‘basicHeaderGatherer’
rforcecom.queryMore: no visible global function definition for
  ‘basicTextGatherer’
rforcecom.queryMore: no visible global function definition for
  ‘curlPerform’
rforcecom.queryMore: no visible global function definition for
  ‘xmlRoot’
rforcecom.queryMore: no visible global function definition for
  ‘xmlTreeParse’
rforcecom.queryMore: no visible global function definition for
  ‘xmlValue’
rforcecom.queryMore: no visible global function definition for
  ‘getNodeSet’
rforcecom.queryMore: no visible global function definition for
  ‘xmlParse’
rforcecom.queryMore: no visible binding for global variable ‘xmlToList’
rforcecom.queryMore: no visible global function definition for
  ‘rbind.fill’
rforcecom.search: no visible global function definition for
  ‘basicHeaderGatherer’
rforcecom.search: no visible global function definition for
  ‘basicTextGatherer’
rforcecom.search: no visible global function definition for
  ‘curlEscape’
rforcecom.search: no visible global function definition for
  ‘curlPerform’
rforcecom.search: no visible global function definition for
  ‘getNodeSet’
rforcecom.search: no visible global function definition for ‘xmlParse’
rforcecom.search : <anonymous>: no visible global function definition
  for ‘xmlValue’
rforcecom.search : <anonymous>: no visible global function definition
  for ‘xmlGetAttr’
rforcecom.search: no visible global function definition for ‘xmlRoot’
rforcecom.search: no visible global function definition for
  ‘xmlTreeParse’
rforcecom.search: no visible global function definition for ‘xmlValue’
rforcecom.update: no visible global function definition for
  ‘basicHeaderGatherer’
rforcecom.update: no visible global function definition for
  ‘basicTextGatherer’
rforcecom.update: no visible global function definition for
  ‘curlPerform’
rforcecom.update: no visible global function definition for ‘xmlRoot’
rforcecom.update: no visible global function definition for
  ‘xmlTreeParse’
rforcecom.update: no visible global function definition for ‘xmlValue’
rforcecom.upsert: no visible global function definition for
  ‘basicHeaderGatherer’
rforcecom.upsert: no visible global function definition for
  ‘basicTextGatherer’
rforcecom.upsert: no visible global function definition for
  ‘curlPerform’
rforcecom.upsert: no visible global function definition for ‘xmlRoot’
rforcecom.upsert: no visible global function definition for
  ‘xmlTreeParse’
rforcecom.upsert: no visible global function definition for ‘xmlValue’
rforcecom.upsert: no visible global function definition for
  ‘xmlToDataFrame’
rforcecom.upsert: no visible global function definition for
  ‘getNodeSet’
rforcecom.upsert: no visible global function definition for ‘xmlParse’

DONE
Status: 3 NOTEs

rgauges (0.2.0)

Maintainer: Scott Chamberlain [e-mail] Bug reports: https://github.com/ropensci/rgauges/issues

OK

RIGHT (0.2.0)

Maintainer: Jonghyun Bae [e-mail] Bug reports: https://groups.google.com/forum/?hl=en#!forum/right-user

OK

rinat (0.1.4)

Maintainer: Edmund Hart [e-mail]

OK

rLakeAnalyzer (1.7.6)

Maintainer: Luke Winslow [e-mail]

OK

rLiDAR (0.1)

Maintainer: Carlos A. Silva [e-mail]

OK

Rmisc (1.5)

Maintainer: Ryan M. Hope [e-mail]

OK

rmongodb (1.8.0)

Maintainer: Dmitriy Selivanov [e-mail] Bug reports: https://github.com/mongosoup/rmongodb/issues

checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  as.character.mongo.oid print.mongo.bson print.mongo.oid
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.

checking for GNU extensions in Makefiles ... NOTE
GNU make is a SystemRequirements.

checking compiled code ... NOTE
File ‘rmongodb/libs/rmongodb.so’:
  Found ‘_rand’, possibly from ‘rand’ (C)
    Objects: ‘libmongo/bson.o’, ‘libmongo/mongo.o’
  Found ‘_srand’, possibly from ‘srand’ (C)
    Object: ‘libmongo/bson.o’

Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor the system RNG.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.

DONE
Status: 3 NOTEs

Rmonkey (0.2.11)

Maintainer: Thomas J. Leeper [e-mail] Bug reports: https://github.com/leeper/Rmonkey/issues

OK

RNeXML (2.0.3)

Maintainer: Carl Boettiger [e-mail] Bug reports: https://github.com/ropensci/RNeXML/issues

checking package dependencies ... NOTE
Packages suggested but not available for checking: ‘rrdf’ ‘Sxslt’

DONE
Status: 1 NOTE

rnoaa (0.3.3)

Maintainer: Scott Chamberlain [e-mail] Bug reports: http://www.github.com/ropensci/rnoaa/issues

OK

robustvarComp (0.1-2)

Maintainer: Claudio Agostinelli [e-mail]

checking whether package ‘robustvarComp’ can be installed ... ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/robustvarComp.Rcheck/00install.out’ for details.
Status: 1 ERROR

rplos (0.4.7)

Maintainer: Scott Chamberlain [e-mail] Bug reports: https://github.com/ropensci/rplos/issues

OK

rprime (0.1.0)

Maintainer: Tristan Mahr [e-mail] Bug reports: http://github.com/tjmahr/rprime/issues

OK

RSA (0.9.8)

Maintainer: Felix Schönbrodt [e-mail]

checking whether package ‘RSA’ can be installed ... ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/RSA.Rcheck/00install.out’ for details.
Status: 1 ERROR

RSAGA (0.94-1)

Maintainer: Alexander Brenning [e-mail]

OK

rsdmx (0.4-6)

Maintainer: Emmanuel Blondel [e-mail] Bug reports: https://github.com/opensdmx/rsdmx/issues

OK

RSiteCatalyst (1.4.3)

Maintainer: Randy Zwitch [e-mail] Bug reports: https://github.com/randyzwitch/RSiteCatalyst

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
  2. Error: Validate GetUniqueVisitorVariable using legacy credentials 
  3. Error: Validate GetVersionAccess using legacy credentials 
  4. Error: Validate GetVideoSettings using legacy credentials 
  5. Error: Validate QueueFallout using legacy credentials 
  6. Error: Validate QueueOvertime using legacy credentials 
  7. Error: Validate QueuePathing using legacy credentials 
  8. Error: Validate QueueRanked using legacy credentials 
  9. Error: Validate QueueTrended using legacy credentials 
  1. Error: SCAuth legacy credentials work as expected 
  2. ...

  Error: testthat unit tests failed
  Execution halted

DONE
Status: 1 ERROR, 1 NOTE

rsnps (0.1.6)

Maintainer: Scott Chamberlain [e-mail] Bug reports: https://github.com/ropensci/rsnps/issues

OK

rSPACE (1.1.1)

Maintainer: Martha Ellis [e-mail] Bug reports: http://github.com/mmellis/rSPACE/issues

OK

rspear (0.1-2)

Maintainer: Eduard Szoecs [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

DONE
Status: 1 NOTE

RSPS (1.0)

Maintainer: Milan Bimali [e-mail]

OK

RStorm (0.902)

Maintainer: Maurits Kaptein [e-mail]

checking dependencies in R code ... NOTE
Package in Depends field not imported from: ‘plyr’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.

checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  plot.RStorm plot.Topology print.RStorm print.Topology
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.

checking R code for possible problems ... NOTE
RStorm: no visible global function definition for ‘alply’

DONE
Status: 3 NOTEs

rsunlight (0.3.0)

Maintainer: Scott Chamberlain [e-mail] Bug reports: https://github.com/ropengov/rsunlight/issues

checking package dependencies ... NOTE
Package suggested but not available for checking: ‘rCharts’

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
Malformed Description field: should contain one or more complete sentences.

DONE
Status: 2 NOTEs

rtematres (0.2)

Maintainer: Claas-Thido Pfaff [e-mail]

OK

rvertnet (0.2.2)

Maintainer: Scott Chamberlain [e-mail] Bug reports: https://github.com/ropensci/rvertnet/issues

OK

rWBclimate (0.1.3)

Maintainer: Edmund Hart [e-mail] Bug reports: http://github.com/ropensci/rWBclimate/issues

checking R code for possible problems ... NOTE
check_ISO_code: no visible binding for global variable ‘NoAm_country’
check_ISO_code: no visible binding for global variable ‘SoAm_country’
check_ISO_code: no visible binding for global variable ‘Oceana_country’
check_ISO_code: no visible binding for global variable ‘Africa_country’
check_ISO_code: no visible binding for global variable ‘Asia_country’
check_ISO_code: no visible binding for global variable ‘Eur_country’

DONE
Status: 1 NOTE

RXKCD (1.7-5)

Maintainer: Paolo Sonego [e-mail]

checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
  ‘RJSONIO’ ‘jpeg’ ‘png’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.

checking R code for possible problems ... NOTE
getXKCD: no visible global function definition for ‘fromJSON’
getXKCD: no visible global function definition for ‘readPNG’
getXKCD: no visible global function definition for ‘readJPEG’
getXKCD: no visible global function definition for ‘writePNG’

DONE
Status: 2 NOTEs

rYoutheria (1.0.0)

Maintainer: Tom August [e-mail] Bug reports: https://github.com/biologicalrecordscentre/rYoutheria/issues

OK

scales (0.2.4)

Maintainer: Hadley Wickham [e-mail] Bug reports: https://github.com/hadley/scales/issues

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.

checking dependencies in R code ... NOTE
Namespace in Imports field not imported from: ‘methods’
  All declared Imports should be used.

DONE
Status: 2 NOTEs

scholar (0.1.2)

Maintainer: James Keirstead [e-mail]

OK

selfea (1.0)

Maintainer: Lang Ho Lee [e-mail]

OK

semPlot (1.0.1)

Maintainer: Sacha Epskamp [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

checking dependencies in R code ... NOTE
'library' or 'require' call to ‘MplusAutomation’ in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.

checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  semPlotModel.S4
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.

checking R code for possible problems ... NOTE
semPlotModel.mplus.model: no visible global function definition for
  ‘readModels’

DONE
Status: 4 NOTEs

SensusR (1.0)

Maintainer: Matthew S. Gerber [e-mail]

OK

SeqFeatR (0.1.7)

Maintainer: Bettina Budeus [e-mail]

checking package dependencies ... ERROR
Packages required but not available: ‘Biostrings’ ‘qvalue’ ‘widgetTools’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Status: 1 ERROR

SGP (1.2-0.0)

Maintainer: Damian W. Betebenner [e-mail] Bug reports: https://github.com/CenterForAssessment/SGP/issues

checking package namespace information ... NOTE
  Namespace with empty importFrom: ‘reshape2’

checking installed package size ... NOTE
  installed size is  7.8Mb
  sub-directories of 1Mb or more:
    data   6.9Mb

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.

checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
  ‘SGPdata’ ‘parallel’ ‘randomNames’
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.

checking R code for possible problems ... NOTE
abcSGP: no visible binding for global variable ‘SGPstateData’
analyzeSGP: no visible binding for global variable ‘SGPstateData’
analyzeSGP: no visible global function definition for ‘clusterApplyLB’
analyzeSGP: no visible global function definition for ‘mclapply’
analyzeSGP : <anonymous>: no visible binding for global variable
  ‘SGPstateData’
baselineSGP: no visible binding for global variable ‘SGPstateData’
bubblePlot_Styles: no visible binding for global variable
  ‘SGPstateData’
bubblePlot_Styles : get.my.cutscore.year: no visible binding for global
  variable ‘SGPstateData’
checkSGP: no visible binding for global variable ‘SGPstateData’
checksplineMatrix: no visible binding for global variable
  ‘SGPstateData’
combineSGP: no visible binding for global variable ‘SGPstateData’
combineSGP : get.target.arguments: no visible binding for global
  variable ‘SGPstateData’
csemScoreSimulator: no visible binding for global variable
  ‘SGPstateData’
getAchievementLevel : get.cutscore.label: no visible binding for global
  variable ‘SGPstateData’
getAchievementLevel : getAchievementLevel_INTERNAL: no visible binding
  for global variable ‘SGPstateData’
getKnotsBoundaries: no visible binding for global variable
  ‘SGPstateData’
getKnotsBoundaries : <anonymous>: no visible binding for global
  variable ‘SGPstateData’
getMaxOrderForProgression: no visible binding for global variable
  ‘SGPstateData’
getPercentileTableNames: no visible binding for global variable
  ‘SGPstateData’
getPreferredSGP: no visible binding for global variable ‘SGPstateData’
getTargetInitialStatus: no visible binding for global variable
  ‘SGPstateData’
getTargetSGP: no visible binding for global variable ‘SGPstateData’
getTargetSGPContentArea: no visible binding for global variable
  ‘SGPstateData’
getTargetScaleScore: no visible binding for global variable
  ‘SGPstateData’
getTargetScaleScore: no visible global function definition for
  ‘clusterApplyLB’
getTargetScaleScore : <anonymous>: no visible binding for global
  variable ‘SGPstateData’
getTargetScaleScore: no visible global function definition for
  ‘mclapply’
getYearsContentAreasGrades: no visible binding for global variable
  ‘SGPstateData’
gofSGP : .goodness.of.fit: no visible binding for global variable
  ‘SGPstateData’
growthAchievementPlot: no visible binding for global variable
  ‘SGPstateData’
growthAchievementPlot : get.my.label: no visible binding for global
  variable ‘SGPstateData’
growthAchievementPlot : create.long.cutscores: no visible binding for
  global variable ‘SGPstateData’
growthAchievementPlot : piecewise.transform: no visible binding for
  global variable ‘SGPstateData’
growthAchievementPlot : smoothPercentileTrajectory: no visible binding
  for global variable ‘SGPstateData’
outputSGP : get.my.label: no visible binding for global variable
  ‘SGPstateData’
outputSGP : piecewise.transform: no visible binding for global variable
  ‘SGPstateData’
outputSGP: no visible global function definition for ‘randomNames’
prepareSGP: no visible binding for global variable ‘sgpData_LONG’
sqliteSGP: no visible binding for global variable ‘SGPstateData’
sqliteSGP : get.grade: no visible binding for global variable
  ‘SGPstateData’
sqliteSGP : get.year: no visible binding for global variable
  ‘SGPstateData’
startParallel: no visible global function definition for ‘clusterEvalQ’
startParallel: no visible global function definition for
  ‘clusterExport’
startParallel: no visible global function definition for ‘makeCluster’
stopParallel: no visible global function definition for ‘stopCluster’
studentGrowthPercentiles : .create.coefficient.matrices: no visible
  global function definition for ‘mclapply’
studentGrowthPercentiles : .create.coefficient.matrices: no visible
  global function definition for ‘parLapplyLB’
studentGrowthPercentiles : .simex.sgp: no visible binding for global
  variable ‘SGPstateData’
studentGrowthPercentiles : .simex.sgp: no visible global function
  definition for ‘mclapply’
studentGrowthPercentiles : .simex.sgp: no visible global function
  definition for ‘parLapply’
studentGrowthPercentiles: no visible binding for global variable
  ‘SGPstateData’
studentGrowthPlot: no visible binding for global variable
  ‘SGPstateData’
studentGrowthPlot : get.my.cutscore.year: no visible binding for global
  variable ‘SGPstateData’
studentGrowthPlot_Styles : create.long.cutscores.sgPlot: no visible
  binding for global variable ‘SGPstateData’
studentGrowthPlot_Styles: no visible binding for global variable
  ‘SGPstateData’
studentGrowthProjections : .get.trajectories.and.cuts: no visible
  binding for global variable ‘SGPstateData’
studentGrowthProjections: no visible binding for global variable
  ‘SGPstateData’
summarizeSGP: no visible binding for global variable ‘SGPstateData’
summarizeSGP : summarizeSGP.config: no visible binding for global
  variable ‘SGPstateData’
summarizeSGP : summarizeSGP_INTERNAL: no visible global function
  definition for ‘parLapply’
summarizeSGP : summarizeSGP_INTERNAL: no visible global function
  definition for ‘mclapply’
testSGP: no visible global function definition for ‘detectCores’
visualizeSGP : get.max.order.for.progression: no visible binding for
  global variable ‘SGPstateData’
visualizeSGP : get.gaPlot.iter: no visible binding for global variable
  ‘SGPstateData’
visualizeSGP: no visible binding for global variable ‘SGPstateData’
visualizeSGP: no visible global function definition for
  ‘clusterApplyLB’
visualizeSGP: no visible global function definition for ‘mclapply’
visualizeSGP : get.next.grade: no visible binding for global variable
  ‘SGPstateData’
visualizeSGP : get.my.label: no visible binding for global variable
  ‘SGPstateData’
visualizeSGP : piecewise.transform: no visible binding for global
  variable ‘SGPstateData’
visualizeSGP: no visible global function definition for ‘randomNames’

DONE
Status: 5 NOTEs

sharpshootR (0.7-2)

Maintainer: Dylan Beaudette [e-mail]

OK

simTool (1.0.3)

Maintainer: Marsel Scheer [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.

DONE
Status: 1 NOTE

smatr (3.4-3)

Maintainer: Remko Duursma [e-mail]

checking dependencies in R code ... NOTE
Package in Depends field not imported from: ‘plyr’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.

checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  fitted.sma
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.

checking R code for possible problems ... NOTE
fitted.sma: no visible global function definition for ‘join’

DONE
Status: 3 NOTEs

snht (1.0.2)

Maintainer: Josh Browning [e-mail]

OK

soil.spec (2.1.4)

Maintainer: Andrew Sila [e-mail]

checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
  ‘chemometrics’ ‘spatstat’
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.

checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  plot.Spectra plot.ken.sto plot.trans predict.SpectraPoints
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.

DONE
Status: 2 NOTEs

soilDB (1.5-4)

Maintainer: D.E. Beaudette [e-mail]

checking package dependencies ... NOTE
Packages suggested but not available for checking:
  ‘XMLSchema’ ‘SSOAP’ ‘RODBC’

DONE
Status: 1 NOTE

solarius (0.2.3)

Maintainer: Andrey Ziyatdinov [e-mail]

OK

solr (0.1.4)

Maintainer: Scott Chamberlain [e-mail] Bug reports: http://www.github.com/ropensci/solr/issues

OK

sorvi (0.7.20)

Maintainer: Leo Lahti [e-mail] Bug reports: https://github.com/ropengov/sorvi/issues

OK

spanr (1.0)

Maintainer: Roger Marshall [e-mail]

checking whether package ‘spanr’ can be installed ... ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/spanr.Rcheck/00install.out’ for details.
Status: 1 ERROR

sparseMVN (0.2.0)

Maintainer: Michael Braun [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.

DONE
Status: 1 NOTE

spiders (1.0)

Maintainer: Edward A. Roualdes [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

DONE
Status: 1 NOTE

srd (1.0)

Maintainer: Roger Marshall [e-mail]

checking whether package ‘srd’ can be installed ... ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/srd.Rcheck/00install.out’ for details.
Status: 1 ERROR

ss3sim (0.8.2)

Maintainer: Sean Anderson [e-mail]

checking dependencies in R code ... NOTE
'library' or 'require' call to ‘foreach’ in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.

checking R code for possible problems ... NOTE
run_ss3sim: no visible global function definition for ‘%dopar%’
run_ss3sim: no visible global function definition for ‘foreach’
setup_parallel: no visible global function definition for
  ‘getDoParWorkers’

DONE
Status: 2 NOTEs

SSrat (1.0)

Maintainer: Hans Landsheer [e-mail]

OK

sss (0.0-11)

Maintainer: Andrie de Vries [e-mail]

OK

Stack (2.0-1)

Maintainer: Mike Malecki [e-mail]

OK

statcheck (1.0.1)

Maintainer: Michele B. Nuijten [e-mail]

OK

StatRank (0.0.4)

Maintainer: William Chen [e-mail]

checking R code for possible problems ... NOTE
Visualization.Empirical: no visible global function definition for
  ‘ggplot’
Visualization.Empirical: no visible global function definition for
  ‘aes’
Visualization.Empirical: no visible global function definition for
  ‘geom_bar’
Visualization.Empirical: no visible global function definition for
  ‘scale_x_reverse’
Visualization.Empirical: no visible global function definition for
  ‘ggtitle’
Visualization.Empirical: no visible global function definition for
  ‘labs’
Visualization.Empirical: no visible global function definition for
  ‘scale_y_continuous’
Visualization.Empirical: no visible binding for global variable
  ‘grid.arrange’
Visualization.MultiType: no visible global function definition for
  ‘ggplot’
Visualization.MultiType: no visible global function definition for
  ‘aes’
Visualization.MultiType: no visible global function definition for
  ‘geom_line’
Visualization.MultiType: no visible global function definition for
  ‘labs’
Visualization.MultiType: no visible global function definition for
  ‘geom_vline’
Visualization.MultiType: no visible global function definition for
  ‘scale_color_manual’
Visualization.MultiType: no visible global function definition for
  ‘scale_linetype_manual’
Visualization.MultiType: no visible global function definition for
  ‘theme’
Visualization.MultiType: no visible binding for global variable
  ‘grid.arrange’
Visualization.Pairwise.Probabilities : Generate.Pairwise.Matrix.Plot:
  no visible global function definition for ‘ggplot’
Visualization.Pairwise.Probabilities : Generate.Pairwise.Matrix.Plot:
  no visible global function definition for ‘aes’
Visualization.Pairwise.Probabilities : Generate.Pairwise.Matrix.Plot:
  no visible global function definition for ‘geom_tile’
Visualization.Pairwise.Probabilities : Generate.Pairwise.Matrix.Plot:
  no visible global function definition for ‘geom_text’
Visualization.Pairwise.Probabilities : Generate.Pairwise.Matrix.Plot:
  no visible global function definition for ‘scale_fill_gradient’
Visualization.Pairwise.Probabilities : Generate.Pairwise.Matrix.Plot:
  no visible global function definition for ‘labs’
Visualization.Pairwise.Probabilities : Generate.Pairwise.Matrix.Plot:
  no visible global function definition for ‘scale_x_discrete’
Visualization.Pairwise.Probabilities : Generate.Pairwise.Matrix.Plot:
  no visible global function definition for ‘scale_y_reverse’
Visualization.Pairwise.Probabilities : Generate.Pairwise.Matrix.Plot:
  no visible global function definition for ‘theme_bw’
Visualization.Pairwise.Probabilities : Generate.Pairwise.Matrix.Plot:
  no visible global function definition for ‘theme’
Visualization.Pairwise.Probabilities : Generate.Pairwise.Matrix.Plot:
  no visible global function definition for ‘element_blank’
Visualization.Pairwise.Probabilities : Generate.Pairwise.Matrix.Plot:
  no visible global function definition for ‘element_text’
Visualization.Pairwise.Probabilities : Generate.Pairwise.Matrix.Plot:
  no visible global function definition for ‘coord_fixed’
Visualization.Pairwise.Probabilities : Generate.Pairwise.Matrix.Plot:
  no visible global function definition for ‘guides’
Visualization.Pairwise.Probabilities : Generate.Pairwise.Matrix.Plot:
  no visible global function definition for ‘guide_legend’
Visualization.Pairwise.Probabilities: no visible global function
  definition for ‘grid.arrange’
Visualization.Pairwise.Probabilities: no visible global function
  definition for ‘textGrob’
Visualization.Pairwise.Probabilities: no visible global function
  definition for ‘gpar’
Visualization.RUMplots.Exponential : <anonymous>: no visible global
  function definition for ‘qplot’
Visualization.RUMplots.Exponential : <anonymous>: no visible global
  function definition for ‘labs’
Visualization.RUMplots.Exponential : <anonymous>: no visible global
  function definition for ‘geom_vline’
Visualization.RUMplots.Exponential: no visible binding for global
  variable ‘grid.arrange’
Visualization.RUMplots.Gumbel : <anonymous>: no visible global function
  definition for ‘qplot’
Visualization.RUMplots.Gumbel : <anonymous>: no visible global function
  definition for ‘labs’
Visualization.RUMplots.Gumbel : <anonymous>: no visible global function
  definition for ‘geom_vline’
Visualization.RUMplots.Gumbel: no visible binding for global variable
  ‘grid.arrange’
Visualization.RUMplots.Nonparametric : <anonymous>: no visible global
  function definition for ‘qplot’
Visualization.RUMplots.Nonparametric : <anonymous>: no visible global
  function definition for ‘labs’
Visualization.RUMplots.Nonparametric : <anonymous>: no visible global
  function definition for ‘scale_y_continuous’
Visualization.RUMplots.Nonparametric: no visible binding for global
  variable ‘grid.arrange’
Visualization.Surfaceplots : makewireframe: no visible global function
  definition for ‘wireframe’
Visualization.Surfaceplots: no visible global function definition for
  ‘grid.arrange’

DONE
Status: 1 NOTE

stcm (0.1.0)

Maintainer: Chris Krogslund [e-mail]

OK

strvalidator (1.5.0)

Maintainer: Oskar Hansson [e-mail] Bug reports: https://github.com/OskarHansson/strvalidator/issues

OK

surveydata (0.1-14)

Maintainer: Andrie de Vries [e-mail]

OK

synthpop (1.1-0)

Maintainer: Beata Nowok [e-mail]

checking dependencies in R code ... NOTE
Unexported object imported by a ':::' call: ‘coefplot:::position_dodgev’
  See the note in ?`:::` about the use of this operator.

DONE
Status: 1 NOTE

TAM (1.7-1)

Maintainer: Alexander Robitzsch [e-mail]

checking whether package ‘TAM’ can be installed ... [35s/36s] ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/TAM.Rcheck/00install.out’ for details.
Status: 1 ERROR

taRifx (1.0.6)

Maintainer: Ari B. Friedman [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.

checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
  ‘gdata’ ‘ggplot2’ ‘grid’ ‘lattice’ ‘xtable’
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.

checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  as.matrix.by stack.list
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.

checking R code for possible problems ... NOTE
autoplot.microbenchmark: no visible global function definition for
  ‘ggplot’
autoplot.microbenchmark: no visible global function definition for
  ‘aes’
autoplot.microbenchmark: no visible global function definition for
  ‘coord_cartesian’
autoplot.microbenchmark: no visible global function definition for
  ‘stat_summary’
autoplot.microbenchmark: no visible global function definition for
  ‘opts’
autoplot.microbenchmark: no visible global function definition for
  ‘theme_text’
compareplot: no visible global function definition for ‘grid.newpage’
compareplot: no visible global function definition for
  ‘latticeParseFormula’
compareplot: no visible global function definition for ‘pushViewport’
compareplot: no visible global function definition for ‘viewport’
compareplot: no visible global function definition for ‘grid.layout’
compareplot: no visible global function definition for ‘unit’
compareplot: no visible global function definition for ‘seekViewport’
compareplot: no visible global function definition for ‘grid.rect’
compareplot : makeNat: no visible global function definition for
  ‘convertUnit’
compareplot: no visible global function definition for ‘grid.text’
compareplot: no visible global function definition for ‘gpar’
compareplot: no visible global function definition for ‘grid.lines’
compareplot: no visible global function definition for ‘grid.points’
compareplot: no visible global function definition for ‘grid.polyline’
compareplot: no visible global function definition for ‘upViewport’
compareplot: no visible global function definition for ‘convertUnit’
compareplot: no visible global function definition for ‘popViewport’
hist_horiz: no visible global function definition for
  ‘latticeParseFormula’
latex.table.by: no visible global function definition for ‘xtable’
panel.densityplot.enhanced: no visible global function definition for
  ‘panel.densityplot’
panel.densityplot.enhanced: no visible global function definition for
  ‘unit’
panel.densityplot.enhanced: no visible global function definition for
  ‘grid.text’
panel.densityplot.enhanced: no visible global function definition for
  ‘gpar’
panel.ecdf: no visible global function definition for ‘panel.xyplot’
panel.ecdf: no visible global function definition for ‘panel.lines’
panel.xyplot_rug: no visible global function definition for
  ‘panel.xyplot’
panel.xyplot_rug: no visible global function definition for
  ‘grid.segments’
panel.xyplot_rug: no visible global function definition for ‘unit’
panel.xyplot_rug: no visible global function definition for ‘gpar’
searchPattern: no visible global function definition for ‘interleave’
xtable.CrossTable: no visible global function definition for
  ‘caption<-’
xtable.CrossTable: no visible global function definition for ‘label<-’
xtable.CrossTable: no visible global function definition for ‘align<-’
xtable.CrossTable: no visible global function definition for ‘digits<-’
xtable.CrossTable: no visible global function definition for
  ‘display<-’
xtable.summary.lme: no visible global function definition for
  ‘caption<-’
xtable.summary.lme: no visible global function definition for ‘label<-’
xtable.summary.lme: no visible global function definition for ‘align<-’
xtable.summary.lme: no visible global function definition for
  ‘digits<-’
xtable.summary.lme: no visible global function definition for
  ‘display<-’
xtablelm: no visible global function definition for ‘xtable’

DONE
Status: 4 NOTEs

taxize (0.5.2)

Maintainer: Scott Chamberlain [e-mail] Bug reports: https://github.com/ropensci/taxize/issues

OK

TH.data (1.0-6)

Maintainer: Torsten Hothorn [e-mail]

checking installed package size ... NOTE
  installed size is  5.2Mb
  sub-directories of 1Mb or more:
    data   1.1Mb
    rda    3.8Mb

DONE
Status: 1 NOTE

timeordered (0.9.8)

Maintainer: Benjamin Blonder [e-mail]

OK

TimeProjection (0.2.0)

Maintainer: Jeffrey Wong [e-mail]

checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
  ‘ggplot2’ ‘plyr’
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Packages in Depends field not imported from:
  ‘Matrix’ ‘lubridate’ ‘timeDate’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.

checking R code for possible problems ... NOTE
is.Bizday: no visible global function definition for ‘isWeekday’
plotCalendarHeatmap: no visible global function definition for ‘ddply’
plotCalendarHeatmap: no visible global function definition for ‘.’
plotCalendarHeatmap: no visible binding for global variable ‘year’
plotCalendarHeatmap: no visible binding for global variable ‘month’
plotCalendarHeatmap: no visible binding for global variable ‘week’
plotCalendarHeatmap: no visible global function definition for ‘ggplot’
plotCalendarHeatmap: no visible global function definition for ‘aes’
plotCalendarHeatmap: no visible binding for global variable ‘monthweek’
plotCalendarHeatmap: no visible binding for global variable ‘weekday’
plotCalendarHeatmap: no visible global function definition for
  ‘geom_tile’
plotCalendarHeatmap: no visible global function definition for
  ‘facet_grid’
plotCalendarHeatmap: no visible global function definition for
  ‘scale_fill_gradientn’
projectDate: no visible global function definition for ‘holidayNYSE’
projectDate: no visible global function definition for
  ‘sparse.model.matrix’

DONE
Status: 2 NOTEs

TR8 (0.9.13)

Maintainer: Gionata Bocci [e-mail] Bug reports: https://github.com/GioBo/TR8/issues

OK

trapezoid (2.0-0)

Maintainer: Jeremy Thoms Hetzel [e-mail]

OK

treeclim (1.0.11)

Maintainer: Christian Zang [e-mail]

checking whether package ‘treeclim’ can be installed ... ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/treeclim.Rcheck/00install.out’ for details.
Status: 1 ERROR

treecm (1.2.1)

Maintainer: Marco Bascietto [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
Malformed Description field: should contain one or more complete sentences.

DONE
Status: 1 NOTE

TripleR (1.4.1)

Maintainer: Felix Schönbrodt [e-mail]

OK

unmarked (0.10-6)

Maintainer: Richard Chandler [e-mail]

checking whether package ‘unmarked’ can be installed ... [21s/21s] ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/unmarked.Rcheck/00install.out’ for details.
Status: 1 ERROR

useful (1.1.8)

Maintainer: Jared P. Lander [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

checking use of S3 registration ... WARNING
Registered S3 method from a standard package overwritten by 'useful':
 method   from 
 plot.acf stats

DONE
Status: 1 WARNING, 1 NOTE

userfriendlyscience (0.3-0)

Maintainer: Gjalt-Jorn Peters [e-mail]

OK

ustyc (1.0.0)

Maintainer: Matt Barry [e-mail] Bug reports: https://github.com/mrbcuda/ustyc/issues

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.

DONE
Status: 1 NOTE

vardpoor (0.3.2)

Maintainer: Juris Breidaks [e-mail] Bug reports: https://github.com/CSBLatvia/vardpoor/issues/

OK

vcdExtra (0.6-8)

Maintainer: Michael Friendly [e-mail]

checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘alr3’

DONE
Status: 1 NOTE

vdmR (0.1.1)

Maintainer: Tomokazu Fujino [e-mail]

OK

vetools (1.3-28)

Maintainer: Andrew Sajo-Castelli [e-mail] Bug reports: https://github.com/talassio/vetools/issues

OK

Wats (0.2-16)

Maintainer: Will Beasley [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

DONE
Status: 1 NOTE

WCE (1.0)

Maintainer: Marie-Pierre Sylvestre [e-mail]

checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  knots.WCE
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.

DONE
Status: 1 NOTE

weatherData (0.4.1)

Maintainer: Ram Narasimhan [e-mail]

checking R code for possible problems ... NOTE
getStationCode: no visible binding for global variable
  ‘USAirportWeatherStations’
getStationCode: no visible binding for global variable ‘IntlWxStations’

DONE
Status: 1 NOTE

wordmatch (1.0)

Maintainer: Amit Singh Rathore [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.

checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
  ‘plyr’ ‘reshape2’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.

checking R code for possible problems ... NOTE
wordmatch: no visible global function definition for ‘llply’
wordmatch : <anonymous>: no visible global function definition for
  ‘llply’
wordmatch: no visible global function definition for ‘melt’
wordmatch: no visible global function definition for ‘count’

DONE
Status: 3 NOTEs

wppExplorer (1.6-2)

Maintainer: Hana Sevcikova [e-mail]

OK

WRS2 (0.3-1)

Maintainer: Patrick Mair [e-mail]

checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.

DONE
Status: 1 NOTE

XML2R (0.0.6)

Maintainer: Carson Sievert [e-mail] Bug reports: http://github.com/cpsievert/XML2R/issues

OK

yhatr (0.13.4)

Maintainer: Greg Lamp [e-mail]

OK

ykmeans (1.0)

Maintainer: Yohei Sato [e-mail]

OK

hadley/plyr documentation built on Oct. 15, 2023, 8:20 a.m.