Run cloud_details(, "NA")
for more info
Run cloud_details(, "NA")
for more info
Run cloud_details(, "FAMetA")
for more info
Installation failed.
See ‘/tmp/workdir/FAMetA/new/FAMetA.Rcheck/00install.out’ for details.
* installing *source* package ‘FAMetA’ ...
** package ‘FAMetA’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error: package or namespace load failed for ‘LipidMS’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
there is no package called ‘readMzXmlData’
Execution halted
ERROR: lazy loading failed for package ‘FAMetA’
* removing ‘/tmp/workdir/FAMetA/new/FAMetA.Rcheck/FAMetA’
* installing *source* package ‘FAMetA’ ...
** package ‘FAMetA’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error: package or namespace load failed for ‘LipidMS’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
there is no package called ‘readMzXmlData’
Execution halted
ERROR: lazy loading failed for package ‘FAMetA’
* removing ‘/tmp/workdir/FAMetA/old/FAMetA.Rcheck/FAMetA’
Run cloud_details(, "NA")
for more info
Run cloud_details(, "NA")
for more info
Run cloud_details(, "genekitr")
for more info
* using log directory ‘/tmp/workdir/genekitr/new/genekitr.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘genekitr/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘genekitr’ version ‘1.2.5’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘clusterProfiler’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
* using log directory ‘/tmp/workdir/genekitr/old/genekitr.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘genekitr/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘genekitr’ version ‘1.2.5’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘clusterProfiler’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
Run cloud_details(, "ggPMX")
for more info
* using log directory ‘/tmp/workdir/ggPMX/new/ggPMX.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘ggPMX/DESCRIPTION’ ... OK
* this is package ‘ggPMX’ version ‘1.2.10’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... NOTE
...
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... OK
Running ‘testthat.R’
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... NONE
‘ggPMX-guide.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: 2 NOTEs
* using log directory ‘/tmp/workdir/ggPMX/old/ggPMX.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘ggPMX/DESCRIPTION’ ... OK
* this is package ‘ggPMX’ version ‘1.2.10’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... NOTE
...
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... OK
Running ‘testthat.R’
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... NONE
‘ggPMX-guide.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: 2 NOTEs
Run cloud_details(, "NA")
for more info
Run cloud_details(, "grandR")
for more info
* using log directory ‘/tmp/workdir/grandR/new/grandR.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘grandR/DESCRIPTION’ ... OK
* this is package ‘grandR’ version ‘0.2.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... NOTE
...
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... NONE
‘getting-started.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: 2 NOTEs
* using log directory ‘/tmp/workdir/grandR/old/grandR.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘grandR/DESCRIPTION’ ... OK
* this is package ‘grandR’ version ‘0.2.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... NOTE
...
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... NONE
‘getting-started.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: 2 NOTEs
Run cloud_details(, "lilikoi")
for more info
* using log directory ‘/tmp/workdir/lilikoi/new/lilikoi.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘lilikoi/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘lilikoi’ version ‘2.1.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘RCy3’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
* using log directory ‘/tmp/workdir/lilikoi/old/lilikoi.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘lilikoi/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘lilikoi’ version ‘2.1.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘RCy3’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
Run cloud_details(, "MarketMatching")
for more info
* using log directory ‘/tmp/workdir/MarketMatching/new/MarketMatching.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘MarketMatching/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘MarketMatching’ version ‘1.2.0’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Packages required but not available: 'CausalImpact', 'bsts', 'Boom'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
* using log directory ‘/tmp/workdir/MarketMatching/old/MarketMatching.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘MarketMatching/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘MarketMatching’ version ‘1.2.0’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Packages required but not available: 'CausalImpact', 'bsts', 'Boom'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
Run cloud_details(, "MARVEL")
for more info
* using log directory ‘/tmp/workdir/MARVEL/new/MARVEL.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘MARVEL/DESCRIPTION’ ... OK
* this is package ‘MARVEL’ version ‘1.4.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... NOTE
...
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... NONE
‘MARVEL.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: 2 NOTEs
* using log directory ‘/tmp/workdir/MARVEL/old/MARVEL.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘MARVEL/DESCRIPTION’ ... OK
* this is package ‘MARVEL’ version ‘1.4.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... NOTE
...
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... NONE
‘MARVEL.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: 2 NOTEs
Run cloud_details(, "NA")
for more info
Run cloud_details(, "NA")
for more info
Run cloud_details(, "numbat")
for more info
* using log directory ‘/tmp/workdir/numbat/new/numbat.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘numbat/DESCRIPTION’ ... OK
* this is package ‘numbat’ version ‘1.3.2-1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Packages required but not available: 'ggtree', 'scistreer'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
* using log directory ‘/tmp/workdir/numbat/old/numbat.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘numbat/DESCRIPTION’ ... OK
* this is package ‘numbat’ version ‘1.3.2-1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Packages required but not available: 'ggtree', 'scistreer'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
Run cloud_details(, "oHMMed")
for more info
* using log directory ‘/tmp/workdir/oHMMed/new/oHMMed.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘oHMMed/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘oHMMed’ version ‘1.0.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘cvms’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
* using log directory ‘/tmp/workdir/oHMMed/old/oHMMed.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘oHMMed/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘oHMMed’ version ‘1.0.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘cvms’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
Run cloud_details(, "OlinkAnalyze")
for more info
* using log directory ‘/tmp/workdir/OlinkAnalyze/new/OlinkAnalyze.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘OlinkAnalyze/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘OlinkAnalyze’ version ‘3.6.0’
* package encoding: UTF-8
* checking package namespace information ... OK
...
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... NONE
‘OutlierExclusion.Rmd’ using ‘UTF-8’... OK
‘Vignett.Rmd’ using ‘UTF-8’... OK
‘bridging_introduction.Rmd’ using ‘UTF-8’... OK
‘plate_randomizer.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: 1 NOTE
* using log directory ‘/tmp/workdir/OlinkAnalyze/old/OlinkAnalyze.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘OlinkAnalyze/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘OlinkAnalyze’ version ‘3.6.0’
* package encoding: UTF-8
* checking package namespace information ... OK
...
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... NONE
‘OutlierExclusion.Rmd’ using ‘UTF-8’... OK
‘Vignett.Rmd’ using ‘UTF-8’... OK
‘bridging_introduction.Rmd’ using ‘UTF-8’... OK
‘plate_randomizer.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: 1 NOTE
Run cloud_details(, "NA")
for more info
Run cloud_details(, "NA")
for more info
Run cloud_details(, "SCpubr")
for more info
* using log directory ‘/tmp/workdir/SCpubr/new/SCpubr.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘SCpubr/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘SCpubr’ version ‘2.0.2’
* package encoding: UTF-8
* checking package namespace information ... OK
...
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... OK
Running ‘testthat.R’
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... NONE
‘reference_manual.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: 1 WARNING, 2 NOTEs
* using log directory ‘/tmp/workdir/SCpubr/old/SCpubr.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘SCpubr/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘SCpubr’ version ‘2.0.2’
* package encoding: UTF-8
* checking package namespace information ... OK
...
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... OK
Running ‘testthat.R’
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... NONE
‘reference_manual.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: 1 WARNING, 2 NOTEs
Run cloud_details(, "tidySEM")
for more info
* using log directory ‘/tmp/workdir/tidySEM/new/tidySEM.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘tidySEM/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘tidySEM’ version ‘0.2.6’
* package encoding: UTF-8
* checking package namespace information ... OK
...
‘SMART_LCA_checklist.Rmd’ using ‘UTF-8’... OK
‘Tabulating_results.Rmd’ using ‘UTF-8’... OK
‘lca_confirmatory.Rmd’ using ‘UTF-8’... OK
‘lca_exploratory.Rmd’ using ‘UTF-8’... OK
‘lca_lcga.Rmd’ using ‘UTF-8’... OK
‘lca_ordinal.Rmd’ using ‘UTF-8’... OK
‘sem_graph.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: 1 NOTE
* using log directory ‘/tmp/workdir/tidySEM/old/tidySEM.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘tidySEM/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘tidySEM’ version ‘0.2.6’
* package encoding: UTF-8
* checking package namespace information ... OK
...
‘SMART_LCA_checklist.Rmd’ using ‘UTF-8’... OK
‘Tabulating_results.Rmd’ using ‘UTF-8’... OK
‘lca_confirmatory.Rmd’ using ‘UTF-8’... OK
‘lca_exploratory.Rmd’ using ‘UTF-8’... OK
‘lca_lcga.Rmd’ using ‘UTF-8’... OK
‘lca_ordinal.Rmd’ using ‘UTF-8’... OK
‘sem_graph.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: 1 NOTE
Run cloud_details(, "NA")
for more info
Run cloud_details(, "NA")
for more info
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