Description Usage Format Source
A dataset containing several thousand genes that have been previously identified as having cell type specific expression in the forebrain or cortex.
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A data frame with 3383 rows and 14 variables:
The broadest category for the cell type where this gene was found to be specifically expressed
The subcategory of the cell type where this gene was found to be specifically expressed
the tissue type in which this cell type specific gene expression was originally characterized
The official human gene symbol for the gene. If the experiment was originally performed in mice, this is the top ortholog as defined by HCOP: Orthology Predictions Search http://www.genenames.org/cgi-bin/hcop.
The official mouse gene symbol for the gene. If the experiment was originally performed in human tissue, this is the top ortholog as defined by HCOP: Orthology Predictions Search http://www.genenames.org/cgi-bin/hcop.
The species in which this cell type specific gene expression was originally characterized
The age of the organism in which this cell type specific gene expression was originally characterized
The statistical criterion used to define cell type specificity in the publication that defined this gene as having cell type specific expression
The statistical cut-off used to define cell type specificity in the publication that defined this gene as having cell type specific expression
The comparison group (other cell types) used to define cell type specificity in the publication that defined this gene as having cell type specific expression
The platform (microarray, RNAseq) used to measure gene expression in the publication that defined this gene as having cell type specific expression
An abbreviated citation for the publication that defined this gene as having cell type specific expression
A short descriptor that combines the umbrella cell type, specific cell type, and publication of origin
Categories of cells likely to encompass the majority of cells in the cortex based on the literature
https://sites.google.com/a/umich.edu/megan-hastings-hagenauer/
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