desire_plot: Plot desirability scores

In haleyeidem/integRATE: Integrating omics Data with Desirability Functions

Description

This function plots genes with the top overall desirability scores and, optionally, their desirability scores from all integrated data.

Usage

desire_plot(x, plot_type = plot.type)

Arguments

x	A data matrix where the first column is overall desirability and additional columns are desirability scores from individual tests.
plot_type	Type of plot to create (overall, top, type, study, or all).

Details

By plotting genes with the top overall desirability scores as well as their individual desirability scores from integrated data, the user can visualize not only the most desirable candidates, but also where the desirability signal is coming from within their data.

Value

Returns a geom_point plot generated by ggplot.

haleyeidem/integRATE documentation built on May 17, 2019, 2:26 p.m.