In hancockinformatics/clusterPathways: Cluster Pathways Using Genes and Jaccard Index

knitr::opts_chunk$set(
  echo    = FALSE,
  message = FALSE,
  warning = FALSE,
  comment = ""
)

library(dplyr)

options(
  DT.options = list(
    dom = "ftip"
  )
)

All pathways

params$table_1 %>% 
  arrange(cluster, desc(gene_ratio)) %>% 
  DT::datatable(rownames = FALSE)

Representative pathways

params$table_2 %>% 
  arrange(cluster) %>% 
  DT::datatable(rownames = FALSE)

hancockinformatics/clusterPathways documentation built on March 19, 2022, 7:23 p.m.