Man pages for hanjunwei-lab/LncPath
Identifying the Pathways Regulated by LncRNA Sets of Interest
| drawAHeatMap | Draw a heatmap for the genes of a pathway |
| findSigGenes | Find genes significantly differentially expressed between two... |
| geneSetDetail | Gain insight into the detail of the genes in a certain... |
| getExampleData | Get the example data |
| getNet | Get the background lncRNA-mRNA interaction network |
| lncPath | Identify pathways synergisticly regulated by lncRNA sets. |
| lncPath2Table | Simplify the lncPath object into table |
| LncPathEnvir | The variables in the environment variable 'LncPathEnvir' of... |
| LncPath-internal | LncPath internal functions |
| plotRunningES | Visualize the Kolmogorov-Smirnov running score of pathway |
| printSignifResult | Output the details of significant pathways |
