GetPathwayData: Get the gene sets of pathways

Description Usage Arguments Details Author(s) Examples

View source: R/GetPathwayData.R

Description

Get the gene sets of pathways for the three pathway databases (KEGG; Biocarta; Reactome)

Usage

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Arguments

pathway

choose database of pathway,"kegg","biocarta" or"reactome"

Details

The gene sets of pathways for the three pathway database (KEGG; Biocarta; Reactome)are obtained from the environment variable envData.

Author(s)

Junwei Hanhanjunwei1981@163.com,Siyao Liu liusiyao29@163.com

Examples

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## Not run: 

#obtain the gene sets of  kegg pathways.
pathway<-GetPathwayData("kegg")



## End(Not run)

hanjunwei-lab/MiRSEA documentation built on July 5, 2020, 11:02 a.m.