PAGI-internal: PAGI internal functions

Description Usage Author(s)

Description

These are functions internally called by other functions in the package PAGI and not meant to be called by the user.

Usage

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RandomWalk2igraph(igraphM,VertexWeight,EdgeWeight=TRUE,gamma=0.7)
rw(W,p0,gamma)
calTest(A, class.labels)
CalGIF2(obs.Test, netWorkdata)
PAGI.EnrichmentScore(gene.list, gene.set, correl.vector = NULL)
PAGI.EnrichmentScore2(gene.list, gene.set, correl.vector = NULL)
initializePAGIExample()
initializePAGI()

Author(s)

Junwei Han <hanjunwei1981@163.com> Yanjun Xu <tonghua605@163.com> Haixiu Yang <yanghaixiu@ems.hrbmu.edu.cn> Chunquan Li <lcqbio@yahoo.com.cn> and Xia Li <lixia@hrbmu.edu.cn>


hanjunwei-lab/PAGI documentation built on July 5, 2020, 11:02 a.m.