README.md

In hannzhang/align: Sequence Alignment Visualization

Sequence Alignment Visualization

Description

This package enhances the sequence alignment workflow of Biostrings package by providing alignment visualization using ggplot.

Dependency

• Biostrings https://bioconductor.org/packages/release/bioc/html/Biostrings.html
• ggplot2 https://cran.r-project.org/web/packages/ggplot2/index.html

Installation

library(devtools)
install_github("hannzhang/align")

Example

library(align)
align("ACTCGCAATATGVTAGGVVAG", "ACTTTATGCTATGCGC")

This will produce the following plot.

hannzhang/align documentation built on May 25, 2019, 9:24 a.m.