AddHoleToPolygon | Add holes into Polygons 'AddHoleToPolygon' |
autoPIHMgis | Automatically run PIHMgis based on the input data and... |
BasicPlot | Read multiply PIHM output files and do time-series plot |
BC | Generate the default Boundary Condition 'BC' |
CMAES | Automatically calibrate model, that requires user-defined... |
CommonPoints | Find the common coordinates in two groups of coordinates. |
compareMaps | Plot multiple maps 'compareMaps' |
correctRiverSlope | Convert the bed slope of river, to avoid negative/zero slope... |
count | Count the frequency of numbers 'count' |
datafilter.riv | Filter the river data with a filter 'datafilter.riv' |
DeltaS | Calculate the Change of Storage. 'DeltaS' |
dot-pihm | This is .pihm environment. |
Eudist | Eudilic Distance 'Eudist' |
EXEC | Execute the program in terminal. 'EXEC' |
extractCoords | extract Coordinates of SpatialLines or SpatialPolygons... |
extractRaster | Extract values on Raster map. The line is a straight line... |
fdc | Default Comparison of the observation and simulation 'fdc' |
filebackup | Write a backup file if the file exist 'filebackup' |
fishnet | Generatue fishnet 'fishnet' |
FromToNode | return the FROM and TO nodes index of the SpatialLines... |
fun.lairl | Generate the default landcover parameters for NLCD... |
getAquiferDepth | Calculate the AquiferDepth of mesh cells 'getAquiferDepth' |
getArea | Calculate the area of the cells 'getArea' |
getCentroid | Get the centroids of the cells 'getCentroid' |
getCriticalRiver | Get Index of critical river channels, that is defined as... |
getElevation | Calculate the elevation of mesh cells 'getElevation' |
getOutlets | Get outlet ID(s) 'getOutlets' |
getRiverNodes | Get the From/To nodes of the river. 'getRiverNodes' |
getVertex | Calculate the Vertex of the cells 'getVertex' |
GreenAmpt | Calculate infiltration with Green Ampt method 'GreenAmpt' |
highlight_id | Highlight elements with id. 'highlight_id' |
hydrograph | Plot hydrograph 'hydrograph' |
lc.default | The default land cover parameters from University of... |
lc_EQ | convert equation from Univeristy of Marryland classes to NLCD... |
LineFit | Linefit the observation and simulation 'LineFit' |
map2d | Raster plot the mesh data 'map2d' |
m.DomainDecomposition | Generate triangle mesh domain 'm.DomainDecomposition' |
MeltFactor | Generate the default melt factor 'MeltFactor' |
MeshAtt | Summary of the attributions on Mesh 'MeshAtt' |
MeshData2Raster | SpatialData to Raster 'MeshData2Raster' |
meshSinks | Get the Sink cells in pihm mesh 'meshSinks' |
ModelInfo | Summary of the basic information of PIHM input data.... |
NLCD.colors | Return NLCD colors. 'NLCD.colors' |
NLCD.names | Return NLCD class names. 'NLCD.names' |
NodeIDList | return the Index of nodes in SpatialData 'NodeIDList' |
PIHM | Setup .pihm environment. 'read.tsd' |
pihmAtt | extract Coordinates of SpatialLines or SpatialPolygons... |
pihmcalib | Generate the default PIHM model calibration 'pihmcalib' |
PIHM.filein | Prepare Input file of PIHM 'PIHM.filein' |
PIHMgisR-package | A short title line describing what the package does |
pihm.init | extract Coordinates of SpatialLines or SpatialPolygons... |
PIHM.mask | Generate the raster mask of Mesh domain 'PIHM.mask' |
pihmMesh | Generate the PIHM mesh data from the triangulation 'pihmMesh' |
PIHM-mesh-class | Class of PIHM.mesh 'PIHM.mesh' |
pihmpara | Generate the default PIHM model configuration 'pihm.para' |
pihmRiver | calculate river order, downstream, slope and length... |
PIHM-River-class | Class of PIHM.river 'PIHM.river' |
pihmRiverSeg | Generate the river segments table 'pihmRiverSeg' |
plot_animate | Plot animation maps 'plot.animate' |
plot_sp | Plot SpatialPolygons maps 'plot.sp' |
plot_tsd | Plot xts data.. 'plot_tsd' |
png.control | Prepare png figure out. 'png.control' |
PointInDistance | Simplify SpatialData. 'PointInDistance' |
polygonArea | Calculate the Polygon Area; |
Pop2Calib | Apply population to calibration values. 'Pop2Calib' |
pre.files | Generate file path for calibration populations. 'pre.files' |
ProjectCoordinate | Re-project coordinates betwen GCS and PCS 'ProjectCoordinate' |
PTF | Pedotransfer function to generate soil/geol parameter from... |
PTF.geol | Pedotransfer function to generate soil parameter 'PTF.geol' |
PTF.lc | Generate the default land cover parameters of NLCD classes.... |
PTF.soil | Pedotransfer function to generate soil parameter 'PTF.soil' |
QvsO | Default Comparison of the observation and simulation 'QvsO' |
readatt | Read the .att file 'readmesh' |
readcalib | Read the .calib file 'readcalib' |
readchannel | Read the .rivchn file 'readchannel' |
readconfig | Read the configuration (.para, .calib) file 'readconfig' |
read.df | Read the matrix or data.frame file which has (nrow, ncol) in... |
readforc.csv | Read the .csv files in .forc file 'readlc' |
readforc.fn | Read the .forc file 'readlc' |
readgeol | Read the .geol file 'readgeol' |
readic | Read the .ic file 'readic' |
readlai | Read the .lai Time-Series file 'readlai' |
readlc | Read the .lc file 'readlc' |
readmesh | Read the .mesh file 'readmesh' |
readout | Read output file from PIHM |
readpara | Read the .para file 'readpara' |
readriv | Read the .riv file 'readriv' |
readriv.sp | Read the river shapefile 'readriv.sp' |
readsoil | Read the .soil file 'readsoil' |
read.tsd | Read the time-series file, which has c(nrow, ncol,... |
removeholes | Remove the holes in polygons 'removeholes' |
RiverLength | Calculate the river length 'RiverLength' |
RiverSlope | Calculate the river slope 'RiverSlope' |
RiverType | parameters for river types 'RiverType' |
rowMatch | Identify whether every row of x is same as m; |
sac | This is data of one of sub-catchmetn in Sacramento Watershed... |
sh | This is data to be included in my package |
SimpleSpatial | Simplify SpatialData. |
SimplifybyLen | Simplify Polylines by length 'SimplifybyLen' |
sp2PSLG | Convert SpatialLines or SpatialPolygons a Planar Straight... |
sp2raster | SpatialData to Raster 'sp2raster' |
sp.CutSptialLines | Cut sptialLines with threshold. 'sp.CutSptialLines' |
sp.mesh2Shape | Generate triangle mesh domain 'sp.mesh2Shape' |
sp.riv2shp | Convert the PIHM.river class to SpatialLines 'sp.riv2shp' |
sp.RiverDown | determine index of downstream 'sp.RiverOrder' |
sp.RiverOrder | calculate river order 'sp.RiverOrder' |
sp.RiverPath | determine River path, disolve the river network based on... |
sp.RiverSeg | Cut the river by PIHM.mesh 'sp.RiverSeg' |
sp.simplifyLen | Simplify Polylines by length 'sp.simplifyLen' |
sp.Tri2Shape | Generate triangle mesh domain 'sp.Tri2Shape' |
sunapee | This is data of Lake Sunappe to be included in my package |
toCentroid | Find the centroid of the triangles 'toCentroid' |
Tri2Centroid | Centroids of the triangulation 'Tri2Centroid' |
triTopology | Determine the topological relation among triangles. |
ts2df | Convert Time-Series data to data.frame 'ts2df' |
ts2map | Plot map of time-series data 'ts2map' |
wb.all | Calculate the water balance 'wb.all' |
wb.DS | Calculate the Change of Storage. 'wb.DS' |
wb.ele | Calculate the water balance 'wb.ele' |
wb.riv | Calculate the water balance 'wb.riv' |
which_outliers | Find the outliers in a dataset 'which_outliers' |
write.cmaes | write the configuration for CMA-ES method 'write.cmaes' |
write.config | Write PIHM configuration files (.para, .calib, etc.) |
write.df | Write data.frame out into file 'write.df' |
writeforc | Write PIHM .forc file 'writeforc' |
writeinit | Write PIHM .ic file 'writeinit' |
writemesh | Write PIHM .mesh file 'writemesh' |
writeriv | Write PIHM .mesh file 'writemesh' |
writeshape | Write ESRI shapefile out 'writeshape' |
write.tsd | Write xts data out into file 'write.tsd' |
write.xts | Write xts data out into file 'write.xts' |
xy2ID | Convert the 'xy' (X,Y) into Index in 'coords' 'xy2ID' |
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