bcbioRNASeq-class: bcbio RNA-Seq data set

bcbioRNASeq-classR Documentation

bcbio RNA-Seq data set

Description

bcbioRNASeq is an S4 class that extends RangedSummarizedExperiment, and is designed to store a bcbio RNA-seq analysis.

Details

bcbioRNASeq extended SummarizedExperiment prior to v0.2.0, where we migrated to RangedSummarizedExperiment.

Automatic metadata

The metadata() slot always contains:

  • Object version.

  • bcbio data provenance information.

  • File paths and timestamps.

  • R session information.

Note

Updated 2023-10-05.

Author(s)

Michael Steinbaugh, Lorena Pantano


hbc/bcbioRNASeq documentation built on Sept. 17, 2024, 5:47 a.m.