read.ilmn.targets: Read Illumina Data from a Target Dataframe

Description Usage Arguments Details Value Author(s) See Also

View source: R/read-ilmn.R

Description

Read Illumina data from a target dataframe

Usage

1

Arguments

targets

data frame including names of profile files.

...

any other parameters are passed on to read.ilmn.

Details

targets is often created by calling the function readTargets. Rows in targets are arrays and columns contain related array or RNA sample information.

At least one of the two columns called files and/or ctrlfiles should be present in targets, which includes names of summary probe profile files and names of summary control probe profile files respectively. This function calls read.ilmn to read in the data.

Value

An EListRaw-class object. See return value of the function read.ilmn for details.

Author(s)

Wei Shi

See Also

read.ilmn


hdeberg/limma documentation built on Dec. 20, 2021, 3:43 p.m.