leukemia: Microarray expression data of B-ALL, T-ALL and AML samples.

In hdsu-bioquant/ButchR: Non-Negative Matrix Factorization Suite

Microarray expression data of B-ALL, T-ALL and AML samples.

Description

Dataset containing Affymetrix Hgu6800 microarray expression data of B-ALL, T-ALL and AML samples. Original publication: Molecular classification of cancer: class discovery and class prediction by gene expression monitoring. T R Golub, D K Slonim, P Tamayo, C Huard, M Gaasenbeek, J P Mesirov, H Coller, M L Loh, J R Downing, M A Caligiuri, C D Bloomfield, E S Lander. Science. 1999 Oct 15;286(5439):531-7. doi: 10.1126/science.286.5439.531. This dataset had also been used by Brunet et al. (PNAS, 2004) and Gaujoux et al. (BMC Bioinformatics, 2010).

Usage

data(leukemia)

Format

A list with an expression matrix and annotation data frame

matrix

4452 rows/genes and 38 samples

annotation

AL and _AML status with type

...

Source

https://pubmed.ncbi.nlm.nih.gov/10521349/

hdsu-bioquant/ButchR documentation built on Jan. 28, 2023, 6:06 p.m.