export: Export CSV file to MongoDB

In healthinnovation/lis: InnovaLab Toolkit

Export CSV file to MongoDB

Description

This a Python wrapper of the insert_many() method of package pymongo to insert a list of documents as a collection in a database in MongoDB.

Usage

export(filepath, dbname, user, password, interpreter = NULL)

Arguments

filepath	CSV file path.
dbname	Database name.
user	User name.
password	Password.
interpreter	Path of the Python interpreter (optional)

Value

Confirmation message if exporting was successful. Else an error.

Examples

## Not run: 
library(innovar)
data("cars")
write.csv(cars, "cars.csv", row.names = FALSE)
dbname = "<database-name>"
user <- Sys.getenv("USER")
password <- Sys.getenv("PASSWORD")
export("cars.csv", dbname, user, password)

## End(Not run)

healthinnovation/lis documentation built on June 19, 2024, 6:06 a.m.