read.gtf: read.gtf is a function that imports a gtf file and creates an...
In helen-zhu/ConsensusPeaks: A Method for Peak Merging And Distribution Fitting Across Biological Replicates
Description
Usage
Arguments
Value
Description
read.gtf is a function that imports a gtf file and creates an annotation data frame, adapted from exomePeak
Usage
1
read.gtf(PARAMETERS)
Arguments
PARAMETERS
A PARAMETERS list with the parameters indicated in the DPDE4PM function
Value
- chr
chromosome
- feature
genomic feature
- start
start coordinate, base 1
- end
stop coordinate, base 1
- strand
strand
- gene
gene id in the GTF file
- transcript
transcript id in the GTF fiile
helen-zhu/ConsensusPeaks documentation built on Dec. 25, 2021, 9:39 a.m.
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Description Usage Arguments Value
Description
read.gtf is a function that imports a gtf file and creates an annotation data frame, adapted from exomePeak
Usage
1 | read.gtf(PARAMETERS)
|
Arguments
PARAMETERS |
A PARAMETERS list with the parameters indicated in the DPDE4PM function |
Value
- chr
chromosome
- feature
genomic feature
- start
start coordinate, base 1
- end
stop coordinate, base 1
- strand
strand
- gene
gene id in the GTF file
- transcript
transcript id in the GTF fiile
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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