mySeqs: Sequences read from fasta file

In helen307/phyMSAViewer: Provide Phylogenetic tree and MSA visualization from Uniprot IDs

Description

A dataset that contains sequences from ten uniprot IDs, and was read from a fasta file. All the sequences are randomly selected homo sapiens.

Usage

mySeqs

Format

An object of class AAStringSet of length 10.

Details

@format A AAStringSet of length 10, length of the strings varies:

NAMES

Species name of each sequence (homo sapiens), in characters

start

The start index of each sequence, in integers

width

The length of each sequence, in integers

Source

https://www.uniprot.org

https://www.uniprot.org/uniprot/O95644

https://www.uniprot.org/uniprot/O95644

https://www.uniprot.org/uniprot/Q12968

https://www.uniprot.org/uniprot/Q14934

https://www.uniprot.org/uniprot/O94916

https://www.uniprot.org/uniprot/P19838

https://www.uniprot.org/uniprot/Q00653

https://www.uniprot.org/uniprot/Q01201

https://www.uniprot.org/uniprot/Q04864

https://www.uniprot.org/uniprot/Q04206

References

1. UniProt Consortium. (2015). UniProt: a hub for protein information. Nucleic acids research, 43(D1), D204-D212.

helen307/phyMSAViewer documentation built on Jan. 1, 2021, 3:16 a.m.