taxa.table | R Documentation |
Making taxa table for software Phylomatic, as "Family/Genus/species"
taxa.table(x, file = NULL, substitute.sp.white.space = "_")
x |
A data.frame generated by function |
file |
A character string referring the name of the plain text file to be generated. |
substitute.sp.white.space |
The substitution symbol between the genus and specific epithet. |
x must be a data.frame generated by function TPL
.
Taxa table for software Phylomatic.
Jinlong Zhang jinlongzhang01@gmail.com
Webb, C. O. and M. J. Donoghue (2005). Phylomatic: tree assembly for applied phylogenetics. Molecular Ecology Notes 5(1): 181-183.
TPL
sp <- c( "Ranunculus japonicus", "Anemone udensis", "Ranunculus repens", "Ranunculus chinensis", "Solanum nigrum", "Punica sp." ) res <- TPL(sp) taxa.table(res)
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