hyperparameter_regression_on_ABC: Estimate a hyperparamter from ABC results via regression.

In hemstrow/GeneArchEst: Estimate Genomic Architecture for Quantitative Traits

Estimate a hyperparamter from ABC results via regression.

Description

Esitmates scale based on ABC results using gam smoothing or regression forest.

Usage

hyperparameter_regression_on_ABC(
  ABC,
  input_independent_parameters,
  formula = scale ~ pi,
  regression_method = "rf",
  num_trees = 10000,
  num_threads = NULL,
  parameter_transforms = reasonable_transform(c("scale", "pi"))$forward,
  parameter_back_transforms = reasonable_transform(c("scale", "pi"))$back,
  acceptance_threshold = 0.005,
  dist_var = "ks",
  hold_percent = 0.25,
  quantiles = seq(0 + 0.001, 1 - 0.001, by = 0.001),
  independent_quantiles = seq(0 + 0.001, 1 - 0.001, by = 0.001)
)

hemstrow/GeneArchEst documentation built on June 10, 2025, 5:06 a.m.