Files in hms-dbmi/drugseqr.data
Data for 'dseqr' and 'rkal' Packages
.Rbuildignore
.Rproj.user/41C9A50A/sources/prop/8854E234
.Rproj.user/41C9A50A/sources/prop/INDEX
.Rproj.user/shared/notebooks/patch-chunk-names
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
NEWS.md
R/dl_data.R
R/dl_drug_es.R
R/get_tx2gene.R
README.md
data-raw/azimuth/get_markers.R
data-raw/azimuth/get_references.R
data-raw/azimuth/human_stimulated_pbmc/human_stimulated_pbmc.R
data-raw/azimuth/markers_2022-04-02.zip
data-raw/azimuth/tcell_effectorness/tcell_effectorness.R
data-raw/azimuth/til_tcells/til_tcell_atlas.R
data-raw/azimuth/virus_cd4_tcells/virus_cd4_tcells.R
data-raw/azimuth/virus_cd8_tcells/virus_cd8_tcells.R
data-raw/drug_annot/pug_view/check_sider.R
data-raw/drug_annot/pug_view/cids.csv
data-raw/drug_annot/pug_view/cids.rds
data-raw/drug_annot/pug_view/cids_old.rds
data-raw/drug_annot/pug_view/get_cids.R
data-raw/drug_annot/pug_view/get_views.sh
data-raw/drug_annot/pug_view/parse_pug.R
data-raw/drug_annot/pug_view/pug_annot.R
data-raw/drug_annot/pug_view/pug_annot.rds
data-raw/drug_annot/pug_view/sider.rds
data-raw/drug_annot/setup.R
data-raw/drug_annot/setup_lincs2.R
data-raw/drug_es/pvals.R
data-raw/drug_es/setup.R
data-raw/drug_es/setup_lincs2.R
data-raw/drug_es/signatures.R
data-raw/drug_gene_queries/drug_gene_queries.R
data-raw/drug_gene_queries/pert_names.R
data-raw/drug_gene_queries/pert_names.rds
data-raw/homologene/homologene.R
data-raw/progeny/data_dprimes.R
data-raw/progeny/data_zscores.R
data-raw/progeny/explore_cors.R
data-raw/progeny/model_matrix.R
data-raw/progeny/signal_genes.R
data-raw/symphony/scMuscle.R
data-raw/symphony/utils_seurat.R
data-raw/tx2gene/tx2gene.R
data-raw/velocity/index_introns.R
inst/extdata/CMAP02_annot.rds
inst/extdata/CMAP02_pdata.rds
inst/extdata/L1000_drugs_annot.rds
inst/extdata/L1000_drugs_pdata.rds
inst/extdata/L1000_genes_annot.rds
inst/extdata/L1000_genes_pdata.rds
inst/extdata/azimuth_markers.qs
inst/extdata/example.qs
inst/extdata/homologene.rds
inst/extdata/hs.rds
inst/extdata/siamese_geneinfo.qs
inst/extdata/tx2gene.qs
inst/extdata/tx2gene_mouse.qs
inst/script/drug_es.R
inst/script/homologene.R
inst/script/tx2gene.R
man/build_ensdb.Rd
man/dl_data.Rd
man/dl_drug_es.Rd
man/get_ensdb_package.Rd
man/get_tx2gene.Rd
man/load_data.Rd
man/load_drug_es.Rd
man/load_tx2gene.Rd
tests/testthat.R
tests/testthat/test-dl_drug_es.R
tests/testthat/test-get_tx2gene.R
vignettes/.gitignore
vignettes/dseqr-data.Rmd
