run_pca: Run PCA on SingleCellExperiment

View source: R/import_scseq.R

run_pcaR Documentation

Run PCA on SingleCellExperiment

Description

Run PCA on SingleCellExperiment

Usage

run_pca(sce)

Arguments

sce

SingleCellExperiment with rowData(sce)$hvg a boolean vector indicating rows (genes) to use as highly variable genes.

Value

sce with PCA reduction


hms-dbmi/dseqr documentation built on Oct. 22, 2024, 12:10 a.m.