qqPlotMinP: FUNCTION_TITLE

In holgerman/toolboxH: Helperfunctions for R

FUNCTION_TITLE

Description

FUNCTION_DESCRIPTION

Usage

qqPlotMinP(
  x,
  number_of_tests = 3,
  xlab = expression(Expected ~ ~-log[10](grDevices::italic(p[min]))),
  ylab = expression(Observed ~ ~-log[10](grDevices::italic(p[min]))),
  main = deparse(substitute(x)),
  las = graphics::par("las"),
  subtitle = paste0("(Considering minimum of ", number_of_tests,
    " independent p-value-series)"),
  envelope = 0.95,
  col = grDevices::palette()[1],
  col.lines = grDevices::palette()[2],
  lwd = 2,
  pch = 16,
  cex = graphics::par("cex"),
  labels = if (!is.null(names(x))) names(x) else seq(along = x),
  id.method = "y",
  id.n = if (id.method[1] == "identify") Inf else 0,
  id.cex = 1,
  id.col = grDevices::palette()[1],
  id.location = "lr",
  grid = TRUE,
  ...
)

Arguments

x	PARAM_DESCRIPTION
number_of_tests	PARAM_DESCRIPTION, Default: 3
xlab	PARAM_DESCRIPTION, Default: expression(Expected ~ ~-log[10](italic(p[min])))
ylab	PARAM_DESCRIPTION, Default: expression(Observed ~ ~-log[10](italic(p[min])))
main	PARAM_DESCRIPTION, Default: deparse(substitute(x))
las	PARAM_DESCRIPTION, Default: par("las")
subtitle	PARAM_DESCRIPTION, Default: paste0("(Considering minimum of ", number_of_tests, " independent p-value-series)")
envelope	PARAM_DESCRIPTION, Default: 0.95
col	PARAM_DESCRIPTION, Default: palette()[1]
col.lines	PARAM_DESCRIPTION, Default: palette()[2]
lwd	PARAM_DESCRIPTION, Default: 2
pch	PARAM_DESCRIPTION, Default: 16
cex	PARAM_DESCRIPTION, Default: par("cex")
labels	PARAM_DESCRIPTION, Default: if (!is.null(names(x))) names(x) else seq(along = x)
id.method	PARAM_DESCRIPTION, Default: 'y'
id.n	PARAM_DESCRIPTION, Default: if (id.method[1] == "identify") Inf else 0
id.cex	PARAM_DESCRIPTION, Default: 1
id.col	PARAM_DESCRIPTION, Default: palette()[1]
id.location	PARAM_DESCRIPTION, Default: 'lr'
grid	PARAM_DESCRIPTION, Default: TRUE
...	PARAM_DESCRIPTION

Details

DETAILS

Value

OUTPUT_DESCRIPTION

Examples

## Not run: 
if(interactive()){
 #EXAMPLE1
 }

## End(Not run)

holgerman/toolboxH documentation built on June 25, 2022, 2:42 p.m.