API for homonecloco/expvip-analysis

Global functions
getBottomAndTopPercent Source code
getGenesContributingEachDecile Source code
get_counts_values_per_5pc_bin Source code Source code Source code
get_dominance_summary_tables_per_factor Source code Source code Source code
get_empty_bins_for_partitions Source code Source code Source code
get_expected_values_per_5pc_bin Source code Source code Source code
get_gene_density Source code Source code Source code
get_goseq_enrichment Source code Source code Source code
get_motifs_for_genes Source code Source code Source code
get_motifs_for_triad Source code Source code Source code
get_stats_title Source code Source code Source code
get_tpms_desc_stats Source code Source code Source code
get_triads_from_genes Source code Source code Source code
is.error Source code Source code Source code
loadGeneInformation Source code Source code Source code
loadValuesFromExperiment Source code
plotExpressedTissuesAcrossChromosomes Source code Source code Source code
plotHistogram Source code Source code Source code
plotTPMOfExpressedTissuesAcrossChromosomes Source code Source code Source code
plot_all_means_filteredtpms_summary Source code Source code Source code
plot_clust_dist Source code Source code Source code
plot_density_expression Source code Source code Source code
plot_distribution_for_factor Source code Source code Source code
plot_dominance_summary Source code Source code Source code
plot_dominance_summary_tables Source code Source code Source code
plot_enrichment Source code Source code Source code
plot_expressed_tissues_across_chromosomes Source code Source code Source code
plot_gene_summary Source code Source code Source code
plot_normalized_triads Source code Source code Source code
plot_per_chromosome_5pc_bins_facet Source code Source code Source code
plot_per_chromosome_5pc_bins_overlap_lines Source code Source code Source code
plot_per_partition_gene_count Source code Source code Source code
plot_tpm_desc_stats Source code Source code Source code
plot_tpms_summary Source code Source code Source code
plot_triad_movment Source code Source code Source code
plot_triad_movment_single Source code Source code Source code
prepare_hist_stats Source code Source code Source code
table_dominance_summary Source code Source code Source code
table_with_title Source code Source code Source code
homonecloco/expvip-analysis documentation built on April 3, 2018, 11:28 p.m.