Files in honzee/RNAseqCNV
A package for CNV analysis from RNA-seq data in B-cell acute lymphoblastic leukaemia

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/RNAseqCNV_wrappper.R R/gen_fig_wrapper.R R/launchApp.R R/shinyAppServer.R R/shinyAppUi.R R/shiny_utils.R
R/sysdata.rda
R/user_defined_analysis/create_rf_models.R R/user_defined_analysis/get_train_dat.R R/user_defined_analysis/get_weights.R README.md
README/figures/arm_level_1.png
README/figures/arm_level_2.png
README/figures/exp_arm.png
README/figures/export_tab.png
README/figures/input_tab.png
README/figures/main_fig_1.png
README/figures/main_fig_2.png
README/figures/manual_analysis_tab.png
README/figures/near_hap_adj.png
README/figures/near_hap_nonadj.png
RNAseqCNVapp.Rproj
inst/extdata/config_mock.txt
inst/extdata/diploid.HTSeq
inst/extdata/diploid.snv
inst/extdata/high_hyperdiploid.HTSeq
inst/extdata/high_hyperdiploid.snv
inst/extdata/low_hypodiploid.HTSeq
inst/extdata/low_hypodiploid.snv
inst/extdata/metadata_mock
inst/extdata/near_haploid.HTSeq
inst/extdata/near_haploid.snv
inst/shinyApp/app.R man/RNAseqCNV_wrapper.Rd man/get_norm_exp.Rd man/launchApp.Rd man/vcf_to_snv.Rd
honzee/RNAseqCNV documentation built on June 17, 2020, 7:01 a.m.