evaluateSme: Compare the embedding of sme with the conventional methods.

In hosscine/SME: Self-Manifolding Embedding

Description

Compare the embedding of sme with the conventional methods.

Usage

evaluateSme(sme, k = 12, embk = 10, return.embs = F, plot.only = F,
  plot.fig = T, col = NULL)

Arguments

sme	self-manifolding embedding object.
k	number of neighbors for Trustworthiness and Continuity.
embk	number of neighbors for embedding of LLE and Isomap.
return.embs	ifT, returns embedding results with listed.
plot.only	if T, doesn't calculate evaluation.
plot.fig	if T, plot embedding result.
col	color of pca.

Value

a matrix contains evaluation.

hosscine/SME documentation built on May 14, 2019, 12:45 p.m.