evaluateSme: Compare the embedding of sme with the conventional methods.

Description Usage Arguments Value

View source: R/sme_evaluate.R

Description

Compare the embedding of sme with the conventional methods.

Usage

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evaluateSme(sme, k = 12, embk = 10, return.embs = F, plot.only = F,
  plot.fig = T, col = NULL)

Arguments

sme

self-manifolding embedding object.

k

number of neighbors for Trustworthiness and Continuity.

embk

number of neighbors for embedding of LLE and Isomap.

return.embs

ifT, returns embedding results with listed.

plot.only

if T, doesn't calculate evaluation.

plot.fig

if T, plot embedding result.

col

color of pca.

Value

a matrix contains evaluation.


hosscine/SME documentation built on April 18, 2018, 11:37 p.m.