BarsAndSetsPlot: Plot omics data along with functional classification
In hschaefer/RBarsAndSets:

This function plots a dataset (e.g. gene expression ratios) as a bar plot along with one or multiple tracks indicating the membership in functional or regulatory categories.

1	BarsAndSetsPlot(bar_values, categories, title = "")

`bar_values`	log transformed, ordered vector of ratios.
`categories`	Dataframe with T/F values indicating the membership in categories and column names as labels.

Expression data is given in the first argument as a vector of ratios. Note that the data should be log transformed and ordered ascending for best results.

Functional categories are given as a dataframe a column of TRUE/FALSE values for each set. Column names of the data frame are used as labels in the plot.

hschaefer/RBarsAndSets documentation built on May 26, 2019, 9:32 a.m.