Man pages for huangyh09/DCATS
Differential Composition Analysis Transformed by a Similarity matrix
| create_simMat | Generate similarity matrix with uniform confusion rate to... |
| dcats_betabin | A beta-binomial regression test with similarity based... |
| dcats_GLM | A Generalised linear model based likelihood ratio testing |
| getPhi | Calculate a global phi for all cell types |
| Haber2017 | Count matrices of intestinal epithelial scRNA-seq data from... |
| Kang2017 | Count matrices of 8 pooled lupus patient samples within two... |
| knn_simMat | Calculate stochastic transition matrix between clusters from... |
| multinom_EM | An EM algorithm to fit a multinomial with maximum likelihood |
| Ren2021 | Count matrix and metadata of a large COVID-19 scRNA-seq data... |
| simulation | Simulated dataset with two conditions |
| simulator_base | Composition size simulator |
| svm_simMat | Calculate stochastic transition matrix between clusters from... |
