Haber2017: Count matrices of intestinal epithelial scRNA-seq data from...

Haber2017R Documentation

Count matrices of intestinal epithelial scRNA-seq data from three conditions

Description

A data containing the count matrices, the similarity matrix and other variables used to generate the similarity matrix from intestinal epithelial single cell RNA sequencing data with three condition

Usage

Haber2017

Format

A list with 7 items:

count_ctrl

the count matrix for the control group

count_Hpoly3

the count matrix for three days after H.polygyrus infection

count_Hpoly10

the count matrix for ten days after H.polygyrus infection

count_Salma

the count matrix for two days after Salmonella infection

svm_mat

the similarity matrix

svmDF

the data frame used to calculate the similarity matrix

source

the source of this dataset

Source

https://www.nature.com/articles/nature24489


huangyh09/DCATS documentation built on Nov. 25, 2022, 7:02 a.m.