huatengh/Classiphy: Classify gene trees basing on the processes generating species-tree gene-tree discordance
R package to run CLASSIPHY, a simulation-based method to classifying loci based on the biological processes that known to produce gene tree and species tree discord. Specifically, this method uses multiple summary statistics in a machine-learning framework to distinguish sets of trees that were produced by ILS versus HGT.
Getting started
Browse package contents
Package details |
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| Author | Huateng Huang, Jeet Sukumaran. L. Lacey Knowles |
| Maintainer | Huateng Huang <huatengh@umich.edu> |
| License | BSD/MIT |
| Version | 0.1.0 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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