plotRefHeatmap: Visualize the reference pattern of gene co-expression.
In hugheylab/deltaccd: Quantify Rhythmic Gene Co-Expression Relative to a Reference
View source: R/deltaccd_plot.R
plotRefHeatmap R Documentation
Visualize the reference pattern of gene co-expression.
Description
Make a heatmap of the reference correlation matrix for gene co-expression.
Usage
plotRefHeatmap(refCor)
Arguments
refCor
Correlation matrix, such as comes from getRefCor().
Value
A ggplot object, which can be saved using ggplot2::ggsave().
Heatmap colors will be directly comparable to any heatmaps created by this
function or by plotHeatmap().
See Also
getRefCor(), plotHeatmap()
Examples
refCor = getRefCor()
pRef = plotRefHeatmap(refCor)
pTest = plotHeatmap(rownames(refCor), GSE19188$emat, GSE19188$groupVec)
hugheylab/deltaccd documentation built on Dec. 3, 2022, 9:51 a.m.
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View source: R/deltaccd_plot.R
| plotRefHeatmap | R Documentation |
Visualize the reference pattern of gene co-expression.
Description
Make a heatmap of the reference correlation matrix for gene co-expression.
Usage
plotRefHeatmap(refCor)
Arguments
refCor |
Correlation matrix, such as comes from |
Value
A ggplot object, which can be saved using ggplot2::ggsave().
Heatmap colors will be directly comparable to any heatmaps created by this
function or by plotHeatmap().
See Also
getRefCor(), plotHeatmap()
Examples
refCor = getRefCor() pRef = plotRefHeatmap(refCor) pTest = plotHeatmap(rownames(refCor), GSE19188$emat, GSE19188$groupVec)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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