Man pages for huishenlab/bisplotti
Plotting package for bisulfite sequencing data
| averagePerBin | Find the average values of x in provided bins |
| averagePerBinBSseqLike | Find the average values of x in provided bins |
| getSeqLengths | Get the seqlengths of a chromosome or all chromosomes |
| hg19.gr | hg19 seqlengths as a GRanges object |
| hg38.gr | hg38 seqlengths as a GRanges object |
| mergeMCols | Merge metadata columns of two GRanges |
| meth1DDensity | Create a 1D density plot of methylation level |
| meth2DDensity | Create a 2D density plot of methylation levels for two... |
| mm10.gr | mm10 seqlengths as a GRanges object |
| mm9.gr | mm9 seqlengths as a GRanges object |
| multiscaleGroupAverage | Create a list of GRangesLists for each step in the multiscale... |
| multiscaleMethylationPlot | Create the multiscale plot from a GRangesList |
| plotEpibed | Plot the results of tabulateEpibed() as a quasi-lollipop... |
| tabulateEpibed | Tabulate to a read or fragment level matrix for CGH or GCH... |
