data_n_code/metabolic_syndrome/README.md

Description

Liver gene expression data (n = 135) from female mice [1] are freely downloaded from The Gene Expression Omnibus (GEO; http://www.ncbi.nlm.nih.gov/geo) with accession number GSE2814.

The files here contain: 1. FemaleLiver-Data.zip: the raw data necessary for running examples.

  1. process_data_DrGA.R: R code examples to process the raw data from scratch before inputting them to DrGA.

  2. processed_data_DrGA.RData: Processed data are available to run DrGA immediately.

  3. output_MS.zip: Gained results from running DrGA.

Reference

1. Ghazalpour, A., et al., Integrating Genetic and Network Analysis to Characterize Genes Related to Mouse Weight. PLOS Genetics, 2006. 2(8): p. e130.


huynguyen250896/DrGA documentation built on Oct. 18, 2023, 5:47 a.m.