RCircos.Get.Plot.Layers: Get the Layer Numbers for Tile Plot

In hzhanghenry/RCircos: Circos 2D Track Plot

Description

Check out overlaps between different genomic positions on same chromosome and set up layer numbers for each line of the genomic data.

Usage

RCircos.Get.Plot.Layers(genomic.data=NULL, genomic.columns=NULL)

Arguments

genomic.data	A data frame with genomic positions (chromosomes, start and end positions) and the positions should be already validated and sorted by chromosome then start position.
genomic.columns	Non-negative integer, total number of columns for genomic positions.

Value

A non-negative integer vector with length same as the total rows of input data.

Author(s)

Henry Zhang

Examples

library(RCircos)
data(RCircos.Tile.Data)
layers <- RCircos.Get.Plot.Layers(RCircos.Tile.Data, 3)

hzhanghenry/RCircos documentation built on Dec. 20, 2021, 5:55 p.m.