getHTTrProbeCounts: Get the raw HTTr count data by epa_sample_id
In i-shah/httRws: Obtain HTTr data from NCCT webservices
Description
Usage
Arguments
Value
Examples
Description
Get the raw HTTr count data by epa_sample_id
Usage
1
getHTTrProbeCounts(epa_sample_id, probe_filter = "av0_10")
Arguments
epa_sample_id
A valid epa_sample_id (e.g. from searchHTTrChem)
probe_filter
removes probes that don't meet minimum requirements
mx0_5: probe maximum greater than 5
av0_10: probe average greater than 10
md0_20: probe median greater than 20
Value
a named list with two dataframes
treatments: all treatment factors (columns) x samples (rows)
counts: all probe counts (columns) x samples (rows)
Examples
1
getHTTrProbeCounts('TP0001718N03',probe_filter='av0_100')
i-shah/httRws documentation built on May 31, 2019, 5:34 a.m.
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Description Usage Arguments Value Examples
Description
Get the raw HTTr count data by epa_sample_id
Usage
1 | getHTTrProbeCounts(epa_sample_id, probe_filter = "av0_10")
|
Arguments
epa_sample_id |
A valid epa_sample_id (e.g. from searchHTTrChem) |
probe_filter |
removes probes that don't meet minimum requirements mx0_5: probe maximum greater than 5 av0_10: probe average greater than 10 md0_20: probe median greater than 20 |
Value
a named list with two dataframes treatments: all treatment factors (columns) x samples (rows) counts: all probe counts (columns) x samples (rows)
Examples
1 | getHTTrProbeCounts('TP0001718N03',probe_filter='av0_100')
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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