RecursiveClustering: RecursiveClustering

In iaconogi/bigSCale2: A framework for the analysis of single cell data (RNA-seq and ATAC-seq) including clustering,phenotyping,pseudotime and inferring gene regulatory networks.

Description

Clusters in an accurate recursive way to force immediate identification of cell-subtypes

Usage

RecursiveClustering(object, modality = "bigscale", fragment = FALSE)

Arguments

fragment	describe fragment
sce	object of the SingleCellExperiment class.

Value

object of the SingleCellExperiment class, with cell-cell distances stored inside

Examples

sce=RecursiveClustering(sce)

iaconogi/bigSCale2 documentation built on July 18, 2020, 8:21 p.m.