mp: mp executes a single run of a Management Procedure

In iagomosqueira/mse: Tools for Running Management Strategy Evaluations using FLR

mp executes a single run of a Management Procedure

Description

An individual management procedure (MP) is run for a number of years, on an operating model, observation error model, control and arguments.

Usage

mp(
  om,
  oem = NULL,
  iem = NULL,
  control = ctrl,
  ctrl = control,
  args,
  scenario = "NA",
  tracking = "missing",
  logfile = tempfile(),
  verbose = !handlers(global = NA),
  parallel = TRUE
)

Arguments

om	The operating model (OM), an object of class FLom or FLombf.
oem	The observation error model (OEM), an object of class FLoem.
iem	The implementation error model (IEM), an object of class FLiem.
ctrl	A control structure for the MP run, an object of class mpCtrl.
args	MSE arguments, list. Only 'iy', the intermediate (starting) year, is required.
scenario	Name of the scenario tested in this run, character.
tracking	Extra elements (rows) to add to the standard tracking FLQuant in its first dimensions, character.
verbose	Should output be verbose or not, logical.

Value

An object of class FLmse.

Examples

# dataset contains both OM (FLom) and OEM (FLoem)
data(sol274)
# Set control: sa and hcr
control <- mpCtrl(list(
  est = mseCtrl(method=perfect.sa),
  hcr = mseCtrl(method=hockeystick.hcr, args=list(lim=0,
  trigger=41500, target=0.27))))
tes <- mp(om, oem=oem, ctrl=control, args=list(iy=2021, fy=2034))
tes3 <- mp(om, oem=oem, ctrl=control, args=list(iy=2021, fy=2034, frq=3))
plot(om, list(annual=tes, triannual=tes3))
# 'perfect.oem' is used if none is given
tes <- mp(om, ctrl=control, args=list(iy=2021, fy=2035))
plot(om, tes)

iagomosqueira/mse documentation built on April 24, 2024, 4:35 a.m.