Man pages for ianjonsen/foieGras
Fit Continuous-Time State-Space and Latent Variable Models for Quality Control of Argos Satellite (and Other) Telemetry Data and for Estimating Changes in Animal Movement
| aes_lst | aes_lst |
| aniMotum-package | 'aniMotum' |
| argos_lc | simulate Argos error classes for LS data |
| dummy | Roxygen commands |
| ellie | Southern elephant seal Argos satellite data (1 individual,... |
| ellp.par | simulate Argos ellipse params & sample errors from... |
| elps | generate error ellipses from x,y coordinates, semi-major,... |
| emf | emf |
| fit_mpm | fit a *Move Persistence Model* ('mpm') |
| fit_ssm | Fit Continuous-Time State-Space Models to filter Argos... |
| fmap | fmap |
| format_data | Coerce input data into expected 'aniMotum' format |
| grab | grab 'tibble"s by name from a 'aniMotum' model object |
| join | join an mpm-estimated behavioural index to ssm-predicted... |
| map | map |
| map_multi_track_base | map_multi_track_base |
| map_multi_track_mp | map_multi_track_mp |
| map_single_track_base | map_single_track_base |
| map_single_track_mp | map_single_track_mp |
| mpfilter | fit the move persistence state-space model to data after... |
| mpm_control | Control Values for 'fit_mpm'. |
| mpmf | fit the move persistence model to regularized location data |
| osar | calculate one-step-ahead (prediction) residuals from a... |
| pf_add_emf | Add error multiplication factors for Argos LS data |
| pf_dup_dates | Find observations with duplicate dates |
| pf_obs_type | Determine observation type: LS, KF, GPS, or GLS |
| pf_sda_filter | Use 'sda' to identify extreme locations |
| pf_sf_project | handle spatial projection |
| plot.mpm_df | plot |
| plot.osar | plot |
| plot.sim | plot |
| plot.sim_fit | plot |
| plot.sim_post | plot |
| plot.ssm_df | plot |
| prefilter | Prepare Argos data for fitting state-space model |
| print.ssm | print 'aniMotum' fit object summary information |
| route_path | Re-route a movement path around land using the 'pathroutr'... |
| rtnorm | rtnorm |
| sda_int | sda_int: filter track for speed, distance and angle. |
| sese | Southern elephant seal Argos satellite data (3 individuals) |
| sese2 | Southern elephant seal Argos satellite data (2 highly... |
| sese2_n | Southern elephant seal Argos satellite data (2 highly... |
| sfilter | fit the state-space model to data after passing through... |
| sim | simulate animal tracks |
| sim_filter | Filter 'sim_fit' simulations |
| sim_fit | simulate animal tracks from a 'ssm' fit |
| similarity_flag | Add similarity flag value to a 'sim_fit' object |
| similarity_var | Add similarity var value to a 'sim_fit' object |
| sim_post | simulate from the posterior of a 'ssm' fit. |
| speedfilter_int | speedfilter_int: filter track for speed. |
| ssm_control | Control Values for 'fit_ssm'. |
| summary.ssm_df | object summaries |
| wese_sb | Weddell seal Argos satellite data (1 individual) |
| wrap_lon | wrap_lon |
