motif.hg19.CTCF.chr22.cov: CTCF motifs on human chromosome 22 with example coverage.

Description Usage Format See Also

Description

This dataset is the same as motif.hg19.CTCF.chr22 but with one additional metadata colum, named "chip", holding ChIP-seq signals for all motifs in a windows of 1000 bp around the motif center as NumericList. The data is from a ChIP-seq experiment for STAT1 in human GM12878 cells. The full bigWig file can be downloaded from ENCODE (Dunham et al. 2012) http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeSydhTfbs/wgEncodeSydhTfbsGm12878Stat1StdSig.bigWig. See motif.hg19.CTCF and motif.hg19.CTCF.chr22 for a more details and the motif data set.

Usage

1

Format

An object of class GRanges of length 917.

See Also

motif.hg19.CTCF, motif.hg19.CTCF.chr22


ibn-salem/sevenC documentation built on May 17, 2019, 11:16 p.m.