Mixture models with spatio-temporal dependencies

area2comp | Convert area to compositional |

compCircle | Plotting function for compositional data |

comPts | Create bonds from Delanay triangles |

convAssess | Update the seasons for LU |

criteriaComp | Update the seasons for LU |

decomposeSPTM | Conversion from a long dataframe to a sptm object |

diagPlot | Diagnostic plot for Gibbs output |

dQ_em | Derivative function of the Q function of an EM algorithm |

estimEM | Wrapper function for EM estimation |

estimGibbs | Wrapper function for Gibbs sampler |

flipComp | Function to flip components spins. |

freqFun | Conversion from a long dataframe to a sptm object |

getBonds | Function to get the bonds based on neighbourhood |

getCanStat | Function to calculate the canonical statistic. |

getCanStatF | Function to calculate the canonical statistic. |

getCompStat | Function to summarize the components' statistics (size and... |

gibbSampler | Gibbs sampler for mixture model. |

gibbSPTM | Gibbs sampler with sptial Potts model for neighbouring... |

gibbSPTMixed | Gibbs sampler with spatial Potts model for neighbouring... |

loopSW | Function performing the loop in the SW algorithm. |

meanFunc | Mean function for EM |

meanFunc2 | Another mean function for EM |

meanFuncSplines | Mean function for EM |

MurraySchemePotts | Simulate the parameters of a Potts model using the Murray... |

p_em | A mytoolbox function to compute the p function of an EM... |

plot.sptmRes | Update the seasons for LU |

plot.SPTMseason | Update the seasons for LU |

predict.sptmRes | Prediction for SPTMres objects |

Q_em | A mytoolbox function to compute the Q function of an EM... |

row_erase | Function to suppress rows from a matrix |

selectBonds | Function to select bonds based on colors and parameters |

setComp | Function to identify components based on bonds. |

SPTMData | Conversion from a long dataframe to a sptm object |

SpTMixture-package | Generate R documentation from inline comments. |

SPTModel | Conversion from a long dataframe to a sptm object |

summaryPlotSPT | Summary plot for SpT processes |

SwendsenWangAlg | Simulate a Potts model using the Swendsen-Wang algorithm |

updateSeason | Update the seasons for LU |

updateSPTMData | Conversion from a long dataframe to a sptm object |

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