Angle Based Joint and Individual Variation Explained

ajive | ajive: Angle based Joint and Individual Variation Explained. |

data_blocks_heatmap | Heatmaps of several data blocks. |

data_heatmap | Heatmap of a single data matrix. |

decomposition_heatmaps | Heatmaps of JIVE decomposition of several blocks. |

get_block_full | Returns one of the full JIVE decomposition matrices. |

get_block_loadings | AJIVE loadings |

get_block_scores | Returns the AJIVE block scores. |

get_common_normalized_scores | Returns the common normalized scores. |

get_final_decomposition | Computes the final JIVE decomposition. |

get_individual_decomposition | Computes the individual matix for a data block. |

get_individual_rank | Individual rank of block k. |

get_joint_decomposition | Computes the joint matix for a data block. |

get_joint_rank | Joint rank. |

get_joint_scores | Computes the joint scores. |

get_svd | Singluar Value Decomposition. |

get_sv_threshold | The singular value threshold. |

get_wedin_bound | Estimate the wedin bound for a data matrix. |

plot_blocks_grid | Makes a plot for each block in a hotizontal grid. |

sample_toy_data | Samples toy two block JIVE data. |

scree_plot | Scree plot |

scree_plot_blocks | Shows the scree plot for each data block. |

svd_reconstruction | Reconstruces the original matrix from its SVD. |

truncate_svd | Truncates an SVD. |

wedin_bound_resampling | Resampling procedure for the wedin bound |

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