data-raw/README.md

In iml-assess/catchR: Analyse catch data and get catch-at-age matrices

Raw data

This is metadata used to efficiently read in DFO/NAFO data.

NOTE: commas have been and should be systematically replaced

ZIFF

• ziff_meta_csv
  • Previous name: Documentation_Versiontotale.xlsx
  • From: \dcqcimlna01a\BD_Peches\Ziff\Format CSV\Fichiers de données
  • Adapted: changed column names and added english info (in accordance with nafo database)
• ziff_meta_dat
  • From: Sylvain H.
  • Adapted: changed column names and added english info
• ziff_gear
  • Previous name: Codes_engin.xls
  • From: \dcqcimlna01a\BD_Peches\Ziff\Documentation\Codes_engin.xls
  • Adapted: + added NAFO gear codes + fused 99 and 72 because they are doubles (one code can only indicate one gear)
• ziff_tonnage
  • Previous name: Documentation_Versiontotale.xlsx (CL_ton tab)
  • From: \dcqcimlna01a\BD_Peches\Ziff\Format CSV\Fichiers de données
  • Adapted: tonnage_class column has name/levels identical to NAFO database
• ziff_region
• ziff_species
  • From: \dcqcimlna01a\BD_Peches\Ziff\Documentation\Codes_especes.xls

length-frequencies

• lf_key_freq
  • Info: fixed width values for frequency data - lines starting with 5 in lf data
  • From: S:\SAS\Peche\Infile_EntFrq.txt with names from JOP
• lf_key_set
  • Info: fixed width values for set ('trait') data - lines starting with 4 in lf data
  • From: S:\SAS\Peche\Infile_EntFrq.txt with names from JOP
• lf_..... From the meta data in the same text file

carbio

• bio_key
  • Info: from R scripts
• bio_zones
  • Info added line for 4SZ that is in lf files but not carbio

iml-assess/catchR documentation built on Nov. 27, 2022, 7:35 p.m.