groupdiff: groupdiff
In inkeso/miscfun: Misc Functions for daily convenience
groupdiff R Documentation
groupdiff
Description
find differential peptides in 2 groupes.
Usage
groupdiff(dat, grp1, grp2, p = 0.001, wtest = "ttest")
Arguments
dat
data matrix or similar
grp1
and
grp2
should be columns of 'dat'.
wtest
following tests are available:
"ttest" - log-2-t-test. 'dat' should be signals
"wilcox" - Wilcoxon rank sum test. 'dat' should be signals too
"fisher" - Exact fisher-test, 'dat' should be T/F-table (specres)
Value
a list with a vector of peptides higher in group 1, a vector
of peptides higher in group 2 and, if fisher-test was done, a table
with the specific-counts (2x2-tables)
inkeso/miscfun documentation built on Feb. 3, 2025, 5:33 p.m.
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| groupdiff | R Documentation |
groupdiff
Description
find differential peptides in 2 groupes.
Usage
groupdiff(dat, grp1, grp2, p = 0.001, wtest = "ttest")
Arguments
dat |
data matrix or similar |
grp1 |
and |
grp2 |
should be columns of 'dat'. |
wtest |
following tests are available: "ttest" - log-2-t-test. 'dat' should be signals "wilcox" - Wilcoxon rank sum test. 'dat' should be signals too "fisher" - Exact fisher-test, 'dat' should be T/F-table (specres) |
Value
a list with a vector of peptides higher in group 1, a vector of peptides higher in group 2 and, if fisher-test was done, a table with the specific-counts (2x2-tables)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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