Man pages for insilico/glmSTIR
Nearest-neighbor Projected-Distance Regression
| attr.range | =========================================================================#... |
| auPRC | auPRC |
| case.control.3sets | case-control interaction effect data |
| createfMRIsimulation | createfMRIsimulation |
| createMainEffects | Create a simulated data set with main effects |
| createSimulation2 | createSimulation2 update to createSimulation2() that allows... |
| detected | detected |
| detectionStats | detectionStats |
| diffRegression | diffRegression |
| EpistasisKatz | Rank variables by EpistasisKatz algorithm. |
| EpistasisRank | 'EpistasisRank' |
| fitInteractionModel | 'fitInteractionModel' |
| fitMainEffectModel | 'fitMainEffectModel' Get the main effect of a variable using... |
| geneLowVarianceFilter | geneLowVarianceFilter |
| generate_structured_corrmat | generate_structured_corrmat |
| getInteractionEffects | 'getInteractionEffects' |
| getMainEffects | 'getMainEffects' Wrapper for fitMainEffectModel with sapply... |
| get_Ri_nearest | Get the indices of samples nearest to Ri |
| hamming.binary | Hamming distance for a binary matrix... |
| knnSURF | knnSURF |
| knnSURF.balanced | knnSURF.balanced |
| knnVec | knnVec |
| mdd.RNAseq.small | RNA-Seq from the paper referenced below. |
| nearestNeighbors | nearestNeighbors |
| nearestNeighbors2 | nearestNeighbors2 |
| nearestNeighborsSeparateHitMiss | nearestNeighborsSeparateHitMiss |
| npdr | npdr |
| npdrDiff | npdrDiff |
| npdrDistances | npdrDistances |
| npdrDistances2 | npdrDistances2 |
| npdrLearner | npdrLearner |
| npdrLearnerCV | 'npdrLearnerCV' |
| predictors.mat | case-control interaction effect data, features only |
| qtrait.3sets | quantitative trait main effect data |
| regain | 'getMainEffects' |
| rownames2columns | Convert rownames to column. |
| splitDataset | Split a data set for machine learning classification |
| testdata10 | Test data from Rinbix |
| uniqueNeighbors | uniqueNeighbors |
| uniReg | uniReg |
| vwok | vwok |
