In interacquas/ignobioR: Managing biodiversity occurrence data considering uncertainty

knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>", fig.width=12, fig.height=8, fig.align = "center")

library(ignobioR)

Prepare the data

data(floratus) # Upload the dataset with occurrence data
head(floratus)

data(park) # Upload the study area
data(unsuitablezone) # Unsuitable areas, i.e. zones where floristic records cannot occur

floratus <- floratus[1:5000,]

Draft the virtual floristic list (VFL)

vfl <- virtual_list(data_flor=floratus, site=park, excl_areas=unsuitablezone, tau=20)

head(vfl$VFL)
vfl$statistics

Draft the Map of Floristic Ignorance (MFI)

mfi <- ignorance_map(data_flor=floratus, site=park, excl_areas=unsuitablezone, tau=20, cellsize=2000)

interacquas/ignobioR documentation built on July 2, 2021, 3:13 a.m.