processMS1data: Process MS-Dial-like MS1 data.frame
In ipb-halle/MetFamily: MetFamily: Discovering Regulated Metabolite Families in Untargeted Metabolomics Studies
View source: R/DataProcessing.R
processMS1data R Documentation
Process MS-Dial-like MS1 data.frame
Description
Processing of MS-Dial-like MS1 data.frame. Includes calculation
of MS1 data mean and log-fold-change (LFC) data
Usage
processMS1data(
sampleNamesToExclude,
numberOfMS1features,
precursorLabels,
grouXXXps,
metaboliteProfileColumnNames,
dataColumnIndecesFunctionFromGroupIndex,
dataColumnsNameFunctionFromGroupIndex,
dataColumnsNameFunctionFromGroupName,
dataColumnsNameFunctionFromGroupNames,
groupNameFunctionFromDataColumnName,
tagsSector,
metaboliteProfile,
progress = FALSE
)
Arguments
sampleNamesToExclude
numberOfMS1features
precursorLabels
grouXXXps
metaboliteProfileColumnNames
dataColumnIndecesFunctionFromGroupIndex
dataColumnsNameFunctionFromGroupIndex
dataColumnsNameFunctionFromGroupName
dataColumnsNameFunctionFromGroupNames
groupNameFunctionFromDataColumnName
tagsSector
metaboliteProfile
progress
ipb-halle/MetFamily documentation built on March 15, 2024, 8:39 a.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/DataProcessing.R
| processMS1data | R Documentation |
Process MS-Dial-like MS1 data.frame
Description
Processing of MS-Dial-like MS1 data.frame. Includes calculation of MS1 data mean and log-fold-change (LFC) data
Usage
processMS1data(
sampleNamesToExclude,
numberOfMS1features,
precursorLabels,
grouXXXps,
metaboliteProfileColumnNames,
dataColumnIndecesFunctionFromGroupIndex,
dataColumnsNameFunctionFromGroupIndex,
dataColumnsNameFunctionFromGroupName,
dataColumnsNameFunctionFromGroupNames,
groupNameFunctionFromDataColumnName,
tagsSector,
metaboliteProfile,
progress = FALSE
)
Arguments
sampleNamesToExclude |
|
numberOfMS1features |
|
precursorLabels |
|
grouXXXps |
|
metaboliteProfileColumnNames |
|
dataColumnIndecesFunctionFromGroupIndex |
|
dataColumnsNameFunctionFromGroupIndex |
|
dataColumnsNameFunctionFromGroupName |
|
dataColumnsNameFunctionFromGroupNames |
|
groupNameFunctionFromDataColumnName |
|
tagsSector |
|
metaboliteProfile |
|
progress |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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