snps: SNP info

In isglobal-brge/DiabPred: Type 2 diabetes prediction based on genomic data with deep learning algorithms

Description

This dataset consists on the SNPs that were used to build the deep learning model used for prediction. The genome reference used for the annotation of these SNPs was hg19.

Usage

snps

Format

A data.frame consisting of 8573 rows and 6 columns

chr

Chromosome where the SNP is located

snp_id

SNP reference ID

chr_start

Start position of the SNP in the chromosome

chr_end

End position of the SNP in the chromosome

ref

Reference allele of the SNP

alt

Alternative allele of the SNP

Details

List of SNPs used to build this package's model

Source

http://www.type2diabetesgenetics.org/

isglobal-brge/DiabPred documentation built on June 14, 2019, 11:02 p.m.