This packages is a suit of functions to process SNP array data in pennCNV format (e.g. having snp_name, chromosome, position, LRR, BAF and genotype). There are functions to perform filtering, quality control of samples and to process raw data to extract the LRR and BAF information of required genomic regions.
Package details |
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Author | Marcos Lopez-Sanchez and Juan R Gonzalez |
Maintainer | Juan R Gonzalez <juanr.gonzalez@isglobal.org> |
License | GPL (>= 2) |
Version | 0.9.5-30 |
URL | http://www.creal.cat/brge and http://www.creal.cat/jrgonzalez/software.htm |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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