isglobal-brge/madloy_v1: Package to detect mosaic LOY from SNP array data

This packages is a suit of functions to process SNP array data in pennCNV format (e.g. having snp_name, chromosome, position, LRR, BAF and genotype). There are functions to perform filtering, quality control of samples and to process raw data to extract the LRR and BAF information of required genomic regions.

Getting started

Package details

AuthorMarcos Lopez-Sanchez and Juan R Gonzalez
MaintainerJuan R Gonzalez <juanr.gonzalez@isglobal.org>
LicenseGPL (>= 2)
Version0.9.5-30
URL http://www.creal.cat/brge and http://www.creal.cat/jrgonzalez/software.htm
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("isglobal-brge/madloy_v1")
isglobal-brge/madloy_v1 documentation built on May 6, 2019, 11:46 a.m.