plotIndSNP: Plots the SNP data of an individual

Description Usage Arguments Value Examples

Description

This function draws the LRR and BAF data for an individual

Usage

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plotIndSNP(x, sample, rsCol = 1, ChrCol = 2, PosCol = 3, LRRCol = 4,
  BAFCol = 5, offset = 0, ...)

Arguments

x

A MADloy object from the MADloy functions.

sample

The identifier of a sample in the MADloy object.

rsCol

Column of the MAD file with the name of the SNP.

ChrCol

Column of the MAD file with the chromosome information.

PosCol

Column of the MAD file with the position information.

LRRCol

Column of the MAD file with the LRR information.

BAFCol

Column of the MAD file with the BAF information.

...

Any other graphical parameter.

Value

A data table with the results for all samples in columns

Examples

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## Not run: 
plotindSNP(resMADloy, "SAMPLE")
## End(Not run)

isglobal-brge/madloy_v1 documentation built on May 6, 2019, 11:46 a.m.