omicRexposome: omicRexposome: Package for exposome and omic data associatin...

Description exposome-omic data association study exposome-omic data integration study

Description

omicRexposome: Package for exposome and omic data associatin and integration

exposome-omic data association study

The packages offers the function association that allows to perform an association study using transcriptome, methylome, etc. as dependent variable and exposome data as independent variable. The function relies on limma pipeline and generates an object of class ResultSet, that can be ploted using plotAssociation.

exposome-omic data integration study

The packages offers the function crossomics that allows to perform two types of integration study: Multi Canonical Correlation Analysis and Multi Co-Inertia Analysis. The function allos to use any type and number of datasets (aka. exposome transcriptome, methylome, etc.). The function generates an object of class ResultSet, that can be ploted using plotIntegration.


isglobal-brge/omicRexposome documentation built on Oct. 20, 2021, 10:09 a.m.