simplisma: Simplisma
In itikadi/EMOGEA: Error Modelled Gene Expression Analysis (EMOGEA) For RNA-Seq Measurements
Description
Usage
Arguments
Value
Author(s)
Description
Function to obtain the initial values for P or C.
Ref: W. Windig, J. Guilment, Anal. Chem., 63, 1425 (1991)
Usage
1
simplisma(expressionMatrix, numberOfComponents, noiseFactor = 0.009)
Arguments
expressionMatrix
The expression matrix organized as (*n* X *m*), *n* is the number of genes and *m* is the number of samples.
You should use the expressionMatrix output of prepareData().
numberOfComponents
The number of number of components (profiles) to be extracted.
noiseFactor
The noise factor.
Value
A list which contains the initial estimates for P (Pinit) and C (Cinit).
Author(s)
Tobias K. Karakach, Federico Taverna
itikadi/EMOGEA documentation built on Dec. 20, 2021, 8:03 p.m.
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Description Usage Arguments Value Author(s)
Description
Function to obtain the initial values for P or C. Ref: W. Windig, J. Guilment, Anal. Chem., 63, 1425 (1991)
Usage
1 | simplisma(expressionMatrix, numberOfComponents, noiseFactor = 0.009)
|
Arguments
expressionMatrix |
The expression matrix organized as (*n* X *m*), *n* is the number of genes and *m* is the number of samples. You should use the expressionMatrix output of prepareData(). |
numberOfComponents |
The number of number of components (profiles) to be extracted. |
noiseFactor |
The noise factor. |
Value
A list which contains the initial estimates for P (Pinit) and C (Cinit).
Author(s)
Tobias K. Karakach, Federico Taverna
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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